Query= MSMg01no179_p11.b1 MSMg01no179_p11.b1 CHROMAT_FILE:
MSMg01no179_p11.b1 PHD_FILE: MSMg01no179_p11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:06 2005
(370 letters)
>mm_chr13_80199012_80199781
Length = 770
Score = 630 bits (326), Expect = 0.0
Identities = 360/382 (94%), Gaps = 17/382 (4%)
Strand = Plus / Minus
Query: 5 gaattccttgtgtcacctgaattaaggaatggttagcaaaacaccaaggctttgaattcg 64
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gaattccttgtgacacatgaattaaggaatggttagcaaaacaccaaggctttgaattcg 420
Query: 65 aactgcattcttaaacctgttttatttgttggtcatttcggtataataatctgttctgag 124
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 419 aactgcattcttaaacctgttttatttgttggtcatttcggtataatattctgttctgag 360
Query: 125 aaaaaaaatcctaagattaagaggattagaaatgataatttcatactattttcaacactt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 aaaaaaaatcctaagattaagaggattagaaatgataatttcatactattttcaacactt 300
Query: 185 gcatataattgtatgtgataagttgtatgttcatatcttcattcctggactgactttatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gcatataattgtatgtgataagttgtatgttcatatcttcattcctggactgactttatt 240
Query: 245 gagtttaacacataaaattgagtaaaaaaa-----------------aaaaattgcctct 287
|||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 239 gagtttaacacataaaattgagtaaaaaaaaaaaaaaaaaaaaaaacaaaaactgcctct 180
Query: 288 gagtcttgatttcattagtatgtggagtggatggagaaacattataatttaatgttttgg 347
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 gagtgttgatttcattagtatgtggagtggatggagaaacattataatttaatgttttgg 120
Query: 348 tgctgagagcaagtgtggtgta 369
||||||||||||||||||||||
Sbjct: 119 tgctgagagcaagtgtggtgta 98
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no179_p11.g1 MSMg01no179_p11.g1 CHROMAT_FILE:
MSMg01no179_p11.g1 PHD_FILE: MSMg01no179_p11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:06 2005
(656 letters)
>mm_chr13_80115741_80116796
Length = 1056
Score = 1245 bits (644), Expect = 0.0
Identities = 653/656 (99%)
Strand = Plus / Plus
Query: 1 actaagtgggaggaatgtgaagtgtcttagagtttgccatattattaccttcaaggtaac 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 actaagtgggaggaatgtgaagtgtcttagagtttgccatattattactttcaaggtaac 260
Query: 61 atcctggattaaggaaagattcctaaaacttcatatagataaaagttattgtgaggtaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcctggattaaggaaagattcctaaaacttcatatagataaaagttattgtgaggtaga 320
Query: 121 ggctataaaatacacgtgactgattgcaaataaataatacaaaaacatgttgaaggaaat 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 ggctataaaatacacgtgactgattgcaaataaataatataaaaacatgttgaaggaaat 380
Query: 181 ccttgaaaacctatatactccactccaaaaatgtagaatatttatatcttttcaaaacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccttgaaaacctatatactccactccaaaaatgtagaatatttatatcttttcaaaacta 440
Query: 241 cagaatagaactgtgatttcacagcaaaattgttatctctaagtaacatactacaaaaat 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 cagaatagaactgtgatttcacagcaaaattgttatctctaagtaacaaactacaaaaat 500
Query: 301 atttttttctaaaatcaaaattaaagtgctgaaaagctaaatttcaattaccttggatag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atttttttctaaaatcaaaattaaagtgctgaaaagctaaatttcaattaccttggatag 560
Query: 361 ggctatattatatacataaatacacagacgcacatatgcatacatttctgcaagttacat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggctatattatatacataaatacacagacgcacatatgcatacatttctgcaagttacat 620
Query: 421 tacatggtttgtttaatgagaaagggatgtaaaagttgacattgatctgtagctactaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tacatggtttgtttaatgagaaagggatgtaaaagttgacattgatctgtagctactaag 680
Query: 481 actgtgcatgttgcaaaataagcacatagcagcagcgttttaattcttgcatctcaatct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 actgtgcatgttgcaaaataagcacatagcagcagcgttttaattcttgcatctcaatct 740
Query: 541 aggatatcatttatccagacagcaactaatttctcactaataactcatgctaaaatatca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aggatatcatttatccagacagcaactaatttctcactaataactcatgctaaaatatca 800
Query: 601 gacataatatttcaaatatatgtttttgtattcccatacaatttaattttaaaaaa 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gacataatatttcaaatatatgtttttgtattcccatacaatttaattttaaaaaa 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
