XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCA
GGAATATCGCATAGAACAGAGGAGAAGATGGTGACTACCAAGCTGAGAGA
AGTAAAATAACTACTCCAGATGTTGGGACACAGCTGTATAACTCCTTCTA
AAGGTTATGGAACACTGAGGAAGATGGAGTTGGACAAATGTAAGAACCAG
ATGATGAAGAATTACGTAGTGAAAGGTCTTTTGGACATAATAAGGCCATT
GCACTAATGGGCTCACTACAGCCATGGTGAGCTGTTTGACTCACTACTGC
TATAATGATTGGCTGGACTCACTACTGCCATAGTGAGCTTCTGGACTCAC
TACTGCCATGATGATCTGCTGGACTCACTACAGCCATGGTGAGCTGAGCA
CATTGTCATCCTTTTCTTGTGGATGGGGAAGAGATCTATGCATCCCATTC
CCTTCCCTAAGCGCTGTGTGTAGCTAATGATTGCTAGATCAGGGATTTTA
GCTTTATTAAGTGCTGTAGTGATAGATAAGTTGCCATGCTCCTGTAAGTG
TCTCTCCTCCTCGCACATGCCCACAATGCTGGGGCAAGCAACTCTTATTT
AACTTAGGGAGTCACACAAACAAGAGTCATGAAAGTCAGAGGGAGGGGTG
AGAAAGGTCTTGAGAGGAAAGGGGGGAGAGGATAAAAGACGGGAGTGAGG
AGAAATGAGTGACCTCCCTCATGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTGCTGCCAGAAAAAAAGTAAACACCTTCCATT
GTCCACTCACTTAACTCTCTTGAAATGCTGCTGCAGCCTGAGTGACTATC
ATCCTTTAATTGCCATGTTTTGTCTTATCCAAGGAGAAACCTGCCCAAAT
CAAACCCTACCAACCCCCAACACCCTTCTCCTGGCACTACAGAAACCCTC
GGTCCTGGGTCTAAGATCTGCCATGAGTAAAGGAAAGGGACAAAGAAAGA
AAGAAGTATTTTGAAAGACACATTTCTTAGTGATTATACCCAGTATTAAA
AAAATGACTCTCATTGATGCAAACCTTACGCTGTCATCACCCTTGGCACT
ACTGGGCTCACGGGAATTGATATAAATTCCAATCACAGTAGCATGAAAAA
AATCAGAGTCATGAGTGACATTCTGAACATACTAAAATGATGTCCCTTCC
CCCCCTTTTTTTTCTTTTTACATTTTTCTTTTTCCCATGGTTAATATTTT
ATTGCTTTTCTATGGAGTTCATGGAAAGACTTATGTACAATTAAGCACTA
AGTTCAAGGAAGTTCAAAGAATAAAACAAGGGCTGACTTCTAAGAGTTGG
AAAGGCTCACCCTACAGTGTTGGGAAGGAACAGTCTCAAAAGTGGGAAAG
AGACTCTACAGAGTTGGGGAGGGTTACCN

Query= MSMg01no180_p01.b1 MSMg01no180_p01.b1 CHROMAT_FILE:
MSMg01no180_p01.b1 PHD_FILE: MSMg01no180_p01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:18 2005
         (664 letters)



>mm_chr13_69053011_69054074
          Length = 1064

 Score = 1261 bits (652), Expect = 0.0
 Identities = 658/660 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccaggaatatcgcatagaacagaggagaagatggtgactaccaagctgagagaag 64
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 gaattccaggaatattgcatagaacagaggagaagatggtgactaccaagctgagagaag 758

                                                                       
Query: 65  taaaataactactccagatgttgggacacagctgtataactccttctaaaggttatggaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 taaaataactactccagatgttgggacacagctgtataactccttctaaaggttatggaa 698

                                                                       
Query: 125 cactgaggaagatggagttggacaaatgtaagaaccagatgatgaagaattacgtagtga 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 cactgaggaagatggagttggacaaatgtaagaaccagatgatgaagaattacgtagtga 638

                                                                       
Query: 185 aaggtcttttggacataataaggccattgcactaatgggctcactacagccatggtgagc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 aaggtcttttggacataataaggccattgcactaatgggctcactacagccatggtgagc 578

                                                                       
Query: 245 tgtttgactcactactgctataatgattggctggactcactactgccatagtgagcttct 304
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 tgtttgactcattactgctataatgattggctggactcactactgccatagtgagcttct 518

                                                                       
Query: 305 ggactcactactgccatgatgatctgctggactcactacagccatggtgagctgagcaca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ggactcactactgccatgatgatctgctggactcactacagccatggtgagctgagcaca 458

                                                                       
Query: 365 ttgtcatccttttcttgtggatggggaagagatctatgcatcccattcccttccctaagc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 ttgtcatccttttcttgtggatggggaagagatctatgcatcccattcccttccctaagc 398

                                                                       
Query: 425 gctgtgtgtagctaatgattgctagatcagggattttagctttattaagtgctgtagtga 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gctgtgtgtagctaatgattgctagatcagggattttagctttattaagtgctgtagtga 338

                                                                       
Query: 485 tagataagttgccatgctcctgtaagtgtctctcctcctcgcacatgcccacaatgctgg 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tagataagttgccatgctcctgtaagtgtctctcctcctcgcacatgcccacaatgctgg 278

                                                                       
Query: 545 ggcaagcaactcttatttaacttagggagtcacacaaacaagagtcatgaaagtcagagg 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ggcaagcaactcttatttaacttagggagtcacacaaacaagagtcatgaaagtcagagg 218

                                                                       
Query: 605 gaggggtgagaaaggtcttgagaggaaaggggggagaggataaaagacgggagtgaggag 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gaggggtgagaaaggtcttgagaggaaaggggggagaggataaaagacgggagtgaggag 158


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space:   689316
Effective search space used:   689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no180_p01.g1 MSMg01no180_p01.g1 CHROMAT_FILE:
MSMg01no180_p01.g1 PHD_FILE: MSMg01no180_p01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:18 2005
         (659 letters)



>mm_chr13_68910884_68911942
          Length = 1059

 Score = 1274 bits (659), Expect = 0.0
 Identities = 659/659 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgctgccagaaaaaaagtaaacaccttccattgtccactcacttaactctcttgaaatgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgctgccagaaaaaaagtaaacaccttccattgtccactcacttaactctcttgaaatgc 260

                                                                       
Query: 61  tgctgcagcctgagtgactatcatcctttaattgccatgttttgtcttatccaaggagaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgctgcagcctgagtgactatcatcctttaattgccatgttttgtcttatccaaggagaa 320

                                                                       
Query: 121 acctgcccaaatcaaaccctaccaacccccaacacccttctcctggcactacagaaaccc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acctgcccaaatcaaaccctaccaacccccaacacccttctcctggcactacagaaaccc 380

                                                                       
Query: 181 tcggtcctgggtctaagatctgccatgagtaaaggaaagggacaaagaaagaaagaagta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcggtcctgggtctaagatctgccatgagtaaaggaaagggacaaagaaagaaagaagta 440

                                                                       
Query: 241 ttttgaaagacacatttcttagtgattatacccagtattaaaaaaatgactctcattgat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttgaaagacacatttcttagtgattatacccagtattaaaaaaatgactctcattgat 500

                                                                       
Query: 301 gcaaaccttacgctgtcatcacccttggcactactgggctcacgggaattgatataaatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcaaaccttacgctgtcatcacccttggcactactgggctcacgggaattgatataaatt 560

                                                                       
Query: 361 ccaatcacagtagcatgaaaaaaatcagagtcatgagtgacattctgaacatactaaaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccaatcacagtagcatgaaaaaaatcagagtcatgagtgacattctgaacatactaaaat 620

                                                                       
Query: 421 gatgtcccttcccccccttttttttctttttacatttttctttttcccatggttaatatt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gatgtcccttcccccccttttttttctttttacatttttctttttcccatggttaatatt 680

                                                                       
Query: 481 ttattgcttttctatggagttcatggaaagacttatgtacaattaagcactaagttcaag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttattgcttttctatggagttcatggaaagacttatgtacaattaagcactaagttcaag 740

                                                                       
Query: 541 gaagttcaaagaataaaacaagggctgacttctaagagttggaaaggctcaccctacagt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaagttcaaagaataaaacaagggctgacttctaagagttggaaaggctcaccctacagt 800

                                                                      
Query: 601 gttgggaaggaacagtctcaaaagtgggaaagagactctacagagttggggagggttac 659
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gttgggaaggaacagtctcaaaagtgggaaagagactctacagagttggggagggttac 859


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space:   680801
Effective search space used:   680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)