Query= MSMg01no181_m11.b1 MSMg01no181_m11.b1 CHROMAT_FILE:
MSMg01no181_m11.b1 PHD_FILE: MSMg01no181_m11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:19 2005
(368 letters)
>mm_chr13_112502461_112503228
Length = 768
Score = 683 bits (353), Expect = 0.0
Identities = 362/365 (99%)
Strand = Plus / Plus
Query: 4 ggaattcactatgtgtaccaagctgacttcaaactctcctgagtgctggaattaaagccc 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcactatgtggaccaagctgacttcaaactctcctgagtgctggaattaaagccc 263
Query: 64 ataccctactcacactgttggcagtacagtgttaaatagtcttgttctttttaaaagctt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ataccctactcacactgttggcagtacagtgttaaatagtcttgttctttttaaaagctt 323
Query: 124 ttgtgttccatatagaattaactatcagtgtccacagagtagtctgctggagttttattg 183
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 324 ttgtgttccatatagaattaactatcagtgtccacagagtagcctgctggagttttattg 383
Query: 184 ggaatatactgaatgaatcattagtcttcttatccaggaacatagattatacatttattt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggaatatactgaatgaatcattagtcttcttatccaggaacatagattatacatttattt 443
Query: 244 aatgtcttcattaagtgtttcatatagttttactcagatctagttgaaggtactgatgta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aatgtcttcattaagtgtttcatatagttttactcagatctagttgaaggtactgatgta 503
Query: 304 agtattttcagttttaaatttcaggtcattatttgtacatagggaaataataggtgtttc 363
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 504 agtattttcagttttaaatttcaggtcattatttgtacatagggaagtaataggtgtttc 563
Query: 364 tgagt 368
|||||
Sbjct: 564 tgagt 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no181_m11.g1 MSMg01no181_m11.g1 CHROMAT_FILE:
MSMg01no181_m11.g1 PHD_FILE: MSMg01no181_m11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:19 2005
(468 letters)
>mm_chr13_112666036_112666902
Length = 867
Score = 882 bits (456), Expect = 0.0
Identities = 465/468 (99%), Gaps = 1/468 (0%)
Strand = Plus / Minus
Query: 1 caggctaccctggcctttctctagtttctctttgttgtgaggactatgttgttagtctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 caggctaccctggcctttctctagtttctctttgttgtgaggactatgttgttagtctgt 529
Query: 61 tgacttgaacaccacagaaggacacttggatcagagtcctcagatgaggttctaaaccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 tgacttgaacaccacagaaggacacttggatcagagtcctcagatgaggttctaaaccca 469
Query: 121 tccaacaaggcacctgaggctgagttatctcacctttctttgtacgtctctgcaaattta 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tccaacaaggcatctgaggctgagttatctcacctttctttgtacgtctctgcaaattta 409
Query: 181 tcaccacatatattctgtttgaccctaatcattcttcatctctggggccaatattaatga 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 408 tcaccacatatattctgtttgaccctaatcattcttcatc-ctggggccaatattaatga 350
Query: 241 caggactccaaagcgtagcagaagtctctgaagccaaactaatgctgatgaagttgaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 caggactccaaagcgtagcagaagtctctgaagccaaactaatgctgatgaagttgaaat 290
Query: 301 tgtaaaataactgcatgtgttatagctaagattccattcctaccctgctaaaccaaatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tgtaaaataactgcatgtgttatagctaagattccattcctaccctgctaaaccaaatta 230
Query: 361 acaacatcaacaacaaaaataggacattctcagtcatcaatgggaggagaggcccttggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 acaacatcaacaacaaaaataggacattctcagtcatcaatgggaggagaggcccttggt 170
Query: 421 tctgtgaaggttctatgctccagtatgccagggccaggaagcaggagt 468
|||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 169 tctgtgaaggttctatgccccagtatgccagggccaggaagcaggagt 122
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 867
Length adjustment: 10
Effective length of query: 458
Effective length of database: 857
Effective search space: 392506
Effective search space used: 392506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
