Query= MSMg01no182_m22.b1 MSMg01no182_m22.b1 CHROMAT_FILE:
MSMg01no182_m22.b1 PHD_FILE: MSMg01no182_m22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:39 2005
(649 letters)
>mm_chr13_95809341_95810389
Length = 1049
Score = 1141 bits (590), Expect = 0.0
Identities = 627/644 (97%), Gaps = 11/644 (1%)
Strand = Plus / Minus
Query: 7 ggaattcagaattccacctgggagacttgggctgtctgaggtcaagttcagcccaagttc 66
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 ggaattcagaatggaacctgggagacttgggctgtctgaggtcaagttcagcccaagttc 657
Query: 67 actggtcagtccaccacgacgacacagtgggaatcactgctgtgagccctttccattaga 126
|||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 656 actggtcagtccaccacgac----cagt-----tcactgctgtgagccctttccattaga 606
Query: 127 cctcctgccctgatgaagacagtcaggaaaccgtgtccttacctcttatttgaatcatca 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 cctcctgccctgatgaagacagtcaggaaaccgtgtccttacctcttatttgaatcatca 546
Query: 187 gtctctctgatttctctcaaatataatctgtgggttctgggaattgatgccgcctgcatg 246
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 545 gtctctctgatttctctcaaatataatctgtgggttctgggaattgatgctgcctgcatg 486
Query: 247 ctaagtgcatattccaccactcacttcctctcccgatgccaaggctacgattaatttttt 306
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 485 ctaagtgcatattccaccactcacttccactcccgatgccaaggctacgattaatttttt 426
Query: 307 ttaaatgtattctctaaaatatttcatccagtatactttactcatattctttcctcttcc 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ttaaatgtattctctaaaatatttcatccagtatactttactcatattctttcctcttcc 366
Query: 367 ccaactcctcctataatctcccccacctccccaatcgtccaacttcatgttctctctctc 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ccaactcctcctataatctcccccacctccccaatcgtccaacttcatgttctctctctc 306
Query: 427 t-t-tctcacagacaaaacaacaacagaacatggagtccaatttgtgttggccaactact 484
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tctctctcacagacaaaacaacaacagaacatggagtccaatttgtgttggccaactact 246
Query: 485 tctaaccatggcttgcccccgagagtgtgactgatattctcattcccagtgcactggggg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tctaaccatggcttgcccccgagagtgtgactgatattctcattcccagtgcactggggg 186
Query: 545 gaactaatttttcctttccaggcagctatcagttgtgaataccttcctaggaaaggtatt 604
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gaactaatttttcctttcctggcagctatcagttgtgaataccttcctaggaaaggtatt 126
Query: 605 tttgtgtccacaccccgccccccgccctgtgctgacattttgtc 648
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 tttgtgtccacaccccgccccccgccctgtgctgacattttgtc 82
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no182_m22.g1 MSMg01no182_m22.g1 CHROMAT_FILE:
MSMg01no182_m22.g1 PHD_FILE: MSMg01no182_m22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:39 2005
(340 letters)
>mm_chr13_95665084_95665823
Length = 740
Score = 569 bits (294), Expect = e-166
Identities = 327/338 (96%)
Strand = Plus / Plus
Query: 1 tctgacgaatctcaaggagctggagaaaaaaatggagagaaatactctctatgtgggagg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 tctgacgaatctcaaggagctggagaaaaaaatggagagaaatactctctatgtggaagg 260
Query: 61 tggaaacttgggtgttttattgtttaaattgtaatttaaacataccctttgttttacaaa 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 261 tggaaacttgggtgttttattgtttaaattataatttaaacataccctttgttgtacaaa 320
Query: 121 catattcaacaacagaaggaaaaggttttgggtgtaatttcctcctttcctggtgtctca 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catattcaacaacagaagaaaaaggttttgggtgtaatttcctcctttcctggtgtctca 380
Query: 181 tctttaagtagaccttgcgtagaatactgtcttcggtagggttttttactgttgtgaata 240
||||||||||||||||| |||||||||||| ||||||||| |||||||||| ||||||||
Sbjct: 381 tctttaagtagaccttgtgtagaatactgttttcggtaggattttttactgctgtgaata 440
Query: 241 gacaccaggaccaaggcaactcttagaaggacaacatttaattggggctggcttacaggt 300
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 gacaccaggatcaaggcaactcttagaaggacaacatttaattggggctggcttgcaggt 500
Query: 301 cagagattcagtccattatcatcaaggtgggagcatgg 338
||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 cagaggttcagtccattatcatcaaggtgggagcatgg 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
