Query= MSMg01no184_c13.b1 MSMg01no184_c13.b1 CHROMAT_FILE:
MSMg01no184_c13.b1 PHD_FILE: MSMg01no184_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:24 2005
(423 letters)
>mm_chr13_30294050_30294866
Length = 817
Score = 698 bits (361), Expect = 0.0
Identities = 392/405 (96%), Gaps = 6/405 (1%)
Strand = Plus / Plus
Query: 15 ggaattctcactacagatttttctgggtgagtatctcagttgggagggggagtgtttaac 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 ggaattctcactacagatttttctgggtgagtatctcagttgggagggggagtgtttaac 274
Query: 75 tgatgaccttgactaggtctctcagggtccataaacgccaagtacacactaaggataatc 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tgatgaccttgactaggtctctcagggtccataaacgccaagtacacactaaggataatc 334
Query: 135 atgcccagctaaatcgcagcgaggcaccgcagtaatgaaggtgaggttaaaaatgtactt 194
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 335 atgcccagctaaatcgcagcgaggcaccacagtaatgaaggtgaggttaaaaatgtactt 394
Query: 195 gttctgtactgttaactctgtacaatcataaggaggccacagaaggtagcaagaaggtac 254
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 395 gttctgtactgttaactctgtacaatcataaggaggccacagaaggtag----aaggta- 449
Query: 255 agcccaggagcctcagagccctcccatttcccctttcagtcttcctggaacagagttagg 314
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 450 -gcccaggagcctcagagccctcccatttcccctttcagtcttcttggaacagagttagg 508
Query: 315 catgtgattatgccttgtccgcagtcactttggttagtacaatggcagggcctgtattta 374
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 509 catgtgattatgccttgtccgcagtcactttggttaatacaatggcagggcctgtaaaca 568
Query: 375 ctaaagattattctgtgtttctggtttcagtgtttctagtgctgt 419
||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 569 ctaaagattatactgtgtttctggtttcagtgtttctagtgctgt 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 817
Length adjustment: 9
Effective length of query: 414
Effective length of database: 808
Effective search space: 334512
Effective search space used: 334512
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no184_c13.g1 MSMg01no184_c13.g1 CHROMAT_FILE:
MSMg01no184_c13.g1 PHD_FILE: MSMg01no184_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:24 2005
(276 letters)
>mm_chr13_30457066_30457741
Length = 676
Score = 497 bits (257), Expect = e-145
Identities = 269/273 (98%)
Strand = Plus / Minus
Query: 4 gcagagagtgccaccaggtactgctggctggcacaaaggaatgggaatgggttagaaggg 63
|||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 476 gcagagagtgccaccaggtattgctggctggcacaaaggagtgggaatgggttagaaggg 417
Query: 64 ggtactgggagggcccacaggaaggacacagctagaacagccagcggctggccagagtcc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ggtactgggagggcccacaggaaggacacagctagaacagccagcggctggccagagtcc 357
Query: 124 ccagggagtgaagtcctgaaacagacagatttttgagggatgtcttcctgtccagataat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ccagggagtgaagtcctgaaacagacagatttttgagggatgtcttcctgtccagataat 297
Query: 184 tagataggcccttttttaaaaatattaactcttaagggaggaatgatgatgtccttgcag 243
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tagataggcccgtttttaaaaatattaactcttaagggaggaatgatgatgtccttgcag 237
Query: 244 ggtcttttggacagtttaaaaagtcacgagtcc 276
||||||||||||||||||||||||||| |||||
Sbjct: 236 ggtcttttggacagtttaaaaagtcacaagtcc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 676
Length adjustment: 9
Effective length of query: 267
Effective length of database: 667
Effective search space: 178089
Effective search space used: 178089
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
