Query= MSMg01no184_o17.b1 MSMg01no184_o17.b1 CHROMAT_FILE:
MSMg01no184_o17.b1 PHD_FILE: MSMg01no184_o17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:29 2005
(421 letters)
>mm_chr13_4915480_4916300
Length = 821
Score = 669 bits (346), Expect = 0.0
Identities = 362/368 (98%), Gaps = 3/368 (0%)
Strand = Plus / Minus
Query: 55 attatttggttatttggatgttaacttcttgtattctttatatattttggatattaacct 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 attatttggttatttggatgttaacttcttgtattctttatatattttggatattaacct 762
Query: 115 tctatcagatatagggttattgaaga-ttttttccacaatctgtaggtaaccaatttgta 173
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 761 tctatcagatatagggttattgaagatttttttccacaatctgtaggtaaccaatttgta 702
Query: 174 aatttttagtatatttttatccc--gtctattgttagaaacagaaaatcaattcatttaa 231
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 701 aatttttagtatatttttatcccaagtctattgttagaaacagaaaatcaattcatttaa 642
Query: 232 tatcaaaattaaaaataaattaggaaattttgctatagtacctgcttccttcatgaagca 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 tatcaaaattaaaaataaattaggaaattttgctatagtacctgcttccttcatgaagca 582
Query: 292 tcatctgtaatatttcaggatgtgagaaagaaagaaaagtatggaatataacttgcaggg 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 tcatctgtaatatttcaggatgtgagaaagaaagaaaagtatggaatataacttgcaggg 522
Query: 352 gctatggcatataaatagtatagcatgtcgaatctttaacattcccaagccaatacccac 411
|||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 521 gctatggcatgtaaatagtagagcatgtcgaatctttaacattcctaagccaatacccac 462
Query: 412 accagtct 419
||||||||
Sbjct: 461 accagtct 454
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 821
Length adjustment: 9
Effective length of query: 412
Effective length of database: 812
Effective search space: 334544
Effective search space used: 334544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no184_o17.g1 MSMg01no184_o17.g1 CHROMAT_FILE:
MSMg01no184_o17.g1 PHD_FILE: MSMg01no184_o17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:29 2005
(279 letters)
>mm_chr13_4809728_4810406
Length = 679
Score = 513 bits (265), Expect = e-150
Identities = 274/277 (98%), Gaps = 1/277 (0%)
Strand = Plus / Plus
Query: 1 ctcctgtgacatacagtggattcaattgtctatctcaattagcatgttataatcctaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcctgtgacatacagtggattcaattgtctatctcaattagcatgttataatcctaagc 260
Query: 61 ttacattaatatgaataatcttcatggggttgtatatattaagatatggaaatgtttact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttacattaatatgaataatcttcatggggttgtatatattaagatatggaaatgtttact 320
Query: 121 atctcataaacactattttaaacttataacaatttatttgtttatttacatcccaaatgc 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atctcataaacattattttaaacttataacaatttatttgtttatttacatcccaaatgc 380
Query: 181 agtcatcccctcctctacccccacactgatcacccttcacagagttcctcctcccaaccc 240
||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtcatctcctcctctacccc-acactgatcacccttcacagagttcctcctcccaaccc 439
Query: 241 ctacacatctcttctgagagggtgggatcccctttat 277
|||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctacacatctcttctgagagggtgggatcccctttat 476
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
