GCAATGGGGGGGTGTTGGGGAGGNNNNNGTGGGGGGGGGGGGGGTGTTTT
ACNNCCNGGNNNNNNNNGGNCAAAAANGGCGGCCGCTAATAGATTCNCTA
NATCGGNANNNGCANGGAANNCNCCNGGATTTCAAACAAAGAGGGNNGNG
NGNANAGNNCCANCCAGGNGGGGGCGGNGGNGGTTTTTGGCTCAAAGAGG
GGGGGNAAGNAAGNNAGNNAGGANNGGGNNGAAAGAAAAGGAGNNGANAG
GGGGGAAAAGAGGAGGGAGGGGGAANAGGAGGGGGAGGGGAANAAAAAAG
AAGAGGAAAGAGGGAGGGAGGAGATTTTTTTTTAATAGAGTGGGGGAGGG
AGTTTTTTAGGTTTTTTTTTGGGGGGGGGGGGGAGGGGGGGGTTTTTTTT
TGTTTTTGNAGAGGGAGAGAGAGGGAGGGGGGAGGAAAAATTTTTTTTTT
TCTCCCCCCCCCCCCGGAAAAGGGAAAAAAGGTGGTTTGTGTCGTTTTCC
CCTTTTGTGTTAAGATATTTTTTTTTTGGTGTGTTGGGTGTGGTTTGCTT
TTTGTTTTGTGGTGGTTTTTTTTTTTGGGGCGTATTGGGTGGTTTTTTTT
TTTTTGTTTGTTTTTTGTTTTTTGTTTTTTGTGGTGGGGTTTTGTTTTTT
TGGTTTTTGTTGGGATTATCAGGGCATTATTGTTTTCAGGCTTGTTTTTT
TTTGTATGTTTTTGTTTTTTTTTGTGGTTGGGTACGTGGTTTTTTTGTTT
TTTTTTTTTTTACGTATGTTGTTATGTTATTTTTTTTTGGAGAGTTTTTG
AAGGTAGCTTTCTTTTTTTTTTTTTTGGGGGCGAAATTATAGGGTTTTTG
TTTTTTTATTTGTTGGTGTN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCAAAATCACGTTGAGGACAAGTTT
ATAATCCATAAAGGGGATAATCTGCCACTGGGGAAGTTATCCTAGAAGAA
ATGTAATTCTTTGAAATATTTATGCTACTAAGGAGAAGGAGAAGAAGGAA
AAAGGATTTCCAAAAATTTAACCCTCTTACTTGTTCCTATTCCCACCTTG
CCAAGAGAAAGAAAAATCCAGCTGACAGGTTTGAAAAAACCAAGTTGTGA
TGTTCAGAAAACAAATGAGCTTTGGGGTTAGTTGAGAATGGTGTGTTCCA
AGTGACTTGAAATTGGGGATATTTCCTCCAGTATTCTTTTTTTCTTTGCT
CATTTGTTTTTGTTTTATTTTTGGTTATGTTTCACAGTAAAAAAAAAAAA
AGGTAAGGTAGTTTCATTATTCCTTAGAACTATTTTCTTTTCTTTTTTTT
TTTCTTTTTTTGTTTCCATTTTTTATTAGGTATTTAGGCTCATTTACATT
TCCATATTTTATTTTCTTAAATGATCATTTAAGTCATAAGTTTCTAGAAG
GAGAAATTGGAATGGCCAATTCAGTCTTGAAAGGATAAGGAGAAAAAACT
CTGATCTCCAACTCTAGAACTCGAAAATTTGCAATCTCCCACTGTTCCCA
GGACATTGTCTCAGTGA

Query= MSMg01no185_c01.g1 MSMg01no185_c01.g1 CHROMAT_FILE:
MSMg01no185_c01.g1 PHD_FILE: MSMg01no185_c01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:45 2005
         (637 letters)



>mm_chr13_117007738_117008780
          Length = 1043

 Score = 1166 bits (603), Expect = 0.0
 Identities = 626/637 (98%), Gaps = 7/637 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   caaaatcacgttgaggacaagtttataatccataaaggggataatctgccactggggaag 60
           ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 636 caaaatcacgttgaggacaagtttataatccgtaaaggggataatctgtcactggggaag 577

                                                                       
Query: 61  ttatcctagaagaaatgtaattctttgaaatatttatgctactaaggagaaggagaagaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ttatcctagaagaaatgtaattctttgaaatatttatgctactaaggagaaggagaagaa 517

                                                                       
Query: 121 ggaaaaaggatttccaaaaatttaaccctcttacttgttcctattcccaccttgccaaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ggaaaaaggatttccaaaaatttaaccctcttacttgttcctattcccaccttgccaaga 457

                                                                       
Query: 181 gaaagaaaaatccagctgacaggtttgaaaaaaccaagttgtgatgttcagaaaacaaat 240
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gagagaaaaatccagctgacaggtttgaaaaaaccaagttgtgatgttcagaaaacaaat 397

                                                                       
Query: 241 gagctttggggttagttgagaatggtgtgttccaagtgacttgaaattggggatatttcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gagctttggggttagttgagaatggtgtgttccaagtgacttgaaattggggatatttcc 337

                                                                       
Query: 301 tccagtattctttttttctttgctcatttgtttttgttttatttttggttatgtttcaca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tccagtattctttttttctttgctcatttgtttttgttttatttttggttatgtttcaca 277

                                                                       
Query: 361 gtaaaaaaaa------aaaaaggtaaggtagtttcattattccttagaactattttcttt 414
           ||||||||||      ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 276 gtaaaaaaaaaaaaataaaaaggtaaggtagtttccttattccttagaactattttcttt 217

                                                                       
Query: 415 tctttttttttttctttttttgtttccattttttattaggtatttaggctcatttacatt 474
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 216 tctttttttttttctttttttgtttccattttttattaggtattta-gctcatttacatt 158

                                                                       
Query: 475 tccatattttattttcttaaatgatcatttaagtcataagtttctagaaggagaaattgg 534
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 tccatattttattttcttaaatgatcatttaagtcataagtttctagaaggagaaattgg 98

                                                                       
Query: 535 aatggccaattcagtcttgaaaggataaggagaaaaaactctgatctccaactctagaac 594
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97  aatggccaattcagtcttgaaaggataaggagaaaaaactctgatctccaactctagaac 38

                                                
Query: 595 tcgaaaatttgcaatctcccactgttcccaggacatt 631
           |||||||||||||||||||||||||||||||||||||
Sbjct: 37  tcgaaaatttgcaatctcccactgttcccaggacatt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1043
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1033
Effective search space:   647691
Effective search space used:   647691
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)