Query= MSMg01no186_g14.b1 MSMg01no186_g14.b1 CHROMAT_FILE:
MSMg01no186_g14.b1 PHD_FILE: MSMg01no186_g14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:23 2005
(316 letters)
>mm_chr13_30916810_30917525
Length = 716
Score = 542 bits (280), Expect = e-158
Identities = 299/312 (95%), Gaps = 11/312 (3%)
Strand = Plus / Plus
Query: 5 gaattcacttatgctttcatctcaaaagaaactgacacaagagttagctcatatttttaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacttatgctttcatctcaaaagaaactgacacaagagttagctcatatttttaa 264
Query: 65 ataaaatcagggatctatgagaccacctgccagagttaaatcacataaaatctttctaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ataaaatcagggatctatgagaccacctgccagagttaaatcacataaaatctttctaga 324
Query: 125 gaggagctcacaaactcctctgctaaaatgtgcaactgtaaggaggagacatgccctctg 184
||||||||||||||||||||| ||| ||||||||||||||||| ||||||
Sbjct: 325 gaggagctcacaaactcctct-----------caaatgtaaggaggagacatgacctctg 373
Query: 185 ctttctctgctgtccgcccttctgcttttgctgtccttatctgtatttttccaaacacca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ctttctctgctgtccgcccttctgcttttgctgtccttatctgtatttttccaaacacca 433
Query: 245 tgatggtttccaaaccttagacatgaagctagagctcagcggaggagcacctgagcagca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tgatggtttccaaaccttagacatgaagctagagctcagcggaggagcacctgagcagca 493
Query: 305 gtggtaaccctg 316
||||||||||||
Sbjct: 494 gtggtaaccctg 505
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no186_g14.g1 MSMg01no186_g14.g1 CHROMAT_FILE:
MSMg01no186_g14.g1 PHD_FILE: MSMg01no186_g14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:23 2005
(179 letters)
>mm_chr13_31071587_31072165
Length = 579
Score = 317 bits (164), Expect = 2e-91
Identities = 176/180 (97%), Gaps = 2/180 (1%)
Strand = Plus / Minus
Query: 1 aacaaaacgaaacaacaaaatgtctcagtccacattcttggaagtgaagagtttgatttg 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aacaaaacaaaacaacaaaatgtctcagtccacattcttggaagtgaagagtttgatttg 270
Query: 61 aattgctgcaatgtgcacacactgcagatctttctgaattagcaagtggaaagtttacat 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aattgctgcaatgtgcacatactgcagatctttctgaattagcaagtggaaagtttacat 210
Query: 121 tttgtatag-aaaaaatgttttattttaatttttttttgtttgattgttttgtttttgtc 179
||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 209 tttgtatagaaaaaaatgttttattttaa-ttttttttgtttgattgttttgtttttgtc 151
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 579
Length adjustment: 8
Effective length of query: 171
Effective length of database: 571
Effective search space: 97641
Effective search space used: 97641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
