Query= MSMg01no186_g18.b1 MSMg01no186_g18.b1 CHROMAT_FILE:
MSMg01no186_g18.b1 PHD_FILE: MSMg01no186_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:24 2005
(315 letters)
>mm_chr13_44817577_44818291
Length = 715
Score = 594 bits (307), Expect = e-174
Identities = 310/311 (99%)
Strand = Plus / Minus
Query: 5 gaattccctacactgatcagggagagcaaaaactgtctcttgccaaatctgtgacattta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gaattccctacactgatcagggagagcaaaaactgtctcttgccaaatctgtgacattta 456
Query: 65 taaagtttacagtccatcttccaaaaccatctcccttctataagtggatgggcacacagt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 taaagtttacagtccatcttccaaaaccatctcccttctataagtggatgggcacacagt 396
Query: 125 agaatgaagaagactccaaccatggtggtcactctgtgtctaaactccatagattattca 184
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 395 agaatgaagaagactccaaccttggtggtcactctgtgtctaaactccatagattattca 336
Query: 185 tttacaacttctttgtgtttccattgtcaacgattccttgaataaaaagaagttggatgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tttacaacttctttgtgtttccattgtcaacgattccttgaataaaaagaagttggatgt 276
Query: 245 ttactagggatgtaaaatcacagcagatctgttcctccaaggcatagaacacaccatgaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ttactagggatgtaaaatcacagcagatctgttcctccaaggcatagaacacaccatgaa 216
Query: 305 tttctcaaggc 315
|||||||||||
Sbjct: 215 tttctcaaggc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no186_g18.g1 MSMg01no186_g18.g1 CHROMAT_FILE:
MSMg01no186_g18.g1 PHD_FILE: MSMg01no186_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:24 2005
(282 letters)
>mm_chr13_44665951_44666633
Length = 683
Score = 466 bits (241), Expect = e-136
Identities = 271/281 (96%), Gaps = 1/281 (0%)
Strand = Plus / Plus
Query: 1 ccttggctacttaacaacattgaggcaagtctgactgttttacattctgtgtctttagaa 60
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 201 ccttggctacttaacaacattgaggcaagtctgactgtttgatattctgtgtctttagaa 260
Query: 61 aaac-aaaaaattagctacttggccacaagttggaaagagggctagagaacggaatctgg 119
|||| ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 261 aaacaaaaaaatcagctacttggccacaagttggaaagagggctagggaacagaatctgg 320
Query: 120 ttgtatcttcaaatgcctgacagaaacagtgtatagagaaagaaggataatggtggacag 179
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 ttgtatcttcaaatgcctgacagaaacagtgtatacagaaagaaggataatggtggacag 380
Query: 180 caggtagccattagctcatgacacataacaggcaagtatgtagcgagcgccctcagatcc 239
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 caggtagccattagctcatgacacataacaggcaagaatgtagcgagcgccctcagatcc 440
Query: 240 aaggtgcaccttccatgtcccagtaagaggaaaaagaagaa 280
||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 441 aaggtgcaccttccatgtcgcagtaagaggaaaaaaaagaa 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 683
Length adjustment: 9
Effective length of query: 273
Effective length of database: 674
Effective search space: 184002
Effective search space used: 184002
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
