Query= MSMg01no192_p22.b1 MSMg01no192_p22.b1 CHROMAT_FILE:
MSMg01no192_p22.b1 PHD_FILE: MSMg01no192_p22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:09 2005
(404 letters)
>mm_chr13_53974281_53975087
Length = 807
Score = 710 bits (367), Expect = 0.0
Identities = 392/401 (97%), Gaps = 3/401 (0%)
Strand = Plus / Plus
Query: 5 gaattcc-catctgtgccctccccctaccccccagcacagccaaggtagaagtgtctggc 63
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacatctgtgccctccccccaccccccagcacagccaaggtagaagtgtctggc 264
Query: 64 ttgatatatgttgttccatagtcacaaaaggagagtgaattttgagtggaagtaaataga 123
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgatacatgttgttccatagtcacaaaaggagagtgaattttgagtggaagtaaataga 324
Query: 124 aagaaacctaaggggattaacccgtggttgtccacatgagttatgtaatccagatcatgg 183
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 325 aagaaacctaaggggattaacccgtggttgtccacatgggttatataatccagatcatgg 384
Query: 184 aaaggcactc--gatctcaaattctattggctgtaaaattacctctgttttctgaatcgc 241
||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaatgcactcttgatctcaaattctattggctgtaaaattacctctgttttctgaatcgc 444
Query: 242 ttttgtacccttaaatctttgaagcagcaatgggctgactctcttccaggaggtgctgac 301
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttttgtacccttgaatctttgaagcagcaatgggctgactctcttccaggaggtgctgac 504
Query: 302 agatcttacatcaaaagggacattttgagttgaagctgatagtattatgggccactagtt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agatcttacatcaaaagggacattttgagttgaagctgatagtattatgggccactagtt 564
Query: 362 gctttaagtgtgtcccctaacacaatacaggaggtaggtgg 402
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gctttaagtgtgtcccctaacacaatacaggaggtaggtgg 605
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 807
Length adjustment: 9
Effective length of query: 395
Effective length of database: 798
Effective search space: 315210
Effective search space used: 315210
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no192_p22.g1 MSMg01no192_p22.g1 CHROMAT_FILE:
MSMg01no192_p22.g1 PHD_FILE: MSMg01no192_p22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:09 2005
(376 letters)
>mm_chr13_54122280_54123055
Length = 776
Score = 700 bits (362), Expect = 0.0
Identities = 371/374 (99%)
Strand = Plus / Minus
Query: 1 aaatgggcttaagtgagttaagcaacaggctaactggcttacgtaattgcacagtgtata 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 574 aaatgggcttaagtgagttaagcaacaggctaactggcttacgtaattgcgcagtgtata 515
Query: 61 agcacaggtcccactgcagctggaggaggacctcagcgttggtttgatggagctgcccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 agcacaggtcccactgcagctggaggaggacctcagcgttggtttgatggagctgcccag 455
Query: 121 ggatcattgagcactggggtatttttctcttcgcatttcctctctgctctgccagcccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ggatcattgagcactggggtatttttctcttcgcatttcctctctgctctgccagcccca 395
Query: 181 tcctaaaaccacttcccttttatcgtcagctatgagaggattgccaggatctcctgggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tcctaaaaccacttcccttttatcgtcagctatgagaggattgccaggatctcctgggat 335
Query: 241 gtgattcggatgtctgcttttatacatctcacaagattaaactcttgctttcctgaagct 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gtgattcagatgtctgcttttatacatctcacaagattaaactcttgctttcctgaagct 275
Query: 301 gcctgcgaatatctacgatcccactggtgctaaatgagccatgccctcaccagcgaacca 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gcctgcaaatatctacgatcccactggtgctaaatgagccatgccctcaccagcgaacca 215
Query: 361 ggggacagtgctca 374
||||||||||||||
Sbjct: 214 ggggacagtgctca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
