Query= MSMg01no193_b02.b1 MSMg01no193_b02.b1 CHROMAT_FILE:
MSMg01no193_b02.b1 PHD_FILE: MSMg01no193_b02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:17 2005
(638 letters)
>mm_chr13_8327026_8328062
Length = 1037
Score = 1174 bits (607), Expect = 0.0
Identities = 628/635 (98%), Gaps = 2/635 (0%)
Strand = Plus / Minus
Query: 4 ggaattctggagatcataatctctgaatatcagctgagacattcagccacatggtttgaa 63
|||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 985 ggaattctggagatcagaat-tctgaatatcagctgagacattcagccacatggtttgaa 927
Query: 64 ccacaactggatttttctattggtagaccagctgttgttgggttagctggaccatagact 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 ccacaactggatttttctattggtagaccagctgttgttgggttagctggaccatagact 867
Query: 124 gtaagacattataatgagtaccctttataaggaccctaattagtataggtagcaataatt 183
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 866 gtaagacattataatgagtaccctttataaggaccttaattagtataggtagcaataatt 807
Query: 184 atattgctttatcttggctataatatctatattaccttggctttgtgccttacctccaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 atattgctttatcttggctataatatctatattaccttggctttgtgccttacctccaaa 747
Query: 244 tattttccatatgacactgaggaaaaatttgctgatccctgcctaaaacaatgtggttat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 tattttccatatgacactgaggaaaaatttgctgatccctgcctaaaacaatgtggttat 687
Query: 304 tatgattagtagcagaaatacactttctttcaaattaaataaatctggtattttggatga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tatgattagtagcagaaatacactttctttcaaattaaataaatctggtattttggatga 627
Query: 364 aagctactgatgttgacatacaattagattaacactttcttagaccttagcagcaacatg 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 aagctactgatgttgacatacaattagattaacactttcttagaccttagcagcaacata 567
Query: 424 caatactgagtaaatgatttttttccccaagtcaatggacattatcaattgacatttttc 483
||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 566 caatagtgagtaaatgatttttt-ccccaagtcaatggacattaccaattgacatttttc 508
Query: 484 tataatgtatatagcagaggcaaaataaactttactagtatattacaatatcaagagtgt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tataatgtatatagcagaggcaaaataaactttactagtatattacaatatcaagagtgt 448
Query: 544 taaaggaaatagatgaaaagtgagataatttatgggtaggttgcaacacaattttgggga 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 taaaggaaatagatgaaaagtgagataatttatgggtaggttgcaacacaattttgggga 388
Query: 604 tgtctgttgagtaaaataagcattaatcacaactg 638
|||||||||||||||||||||||||||||||||||
Sbjct: 387 tgtctgttgagtaaaataagcattaatcacaactg 353
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1037
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1027
Effective search space: 644956
Effective search space used: 644956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no193_b02.g1 MSMg01no193_b02.g1 CHROMAT_FILE:
MSMg01no193_b02.g1 PHD_FILE: MSMg01no193_b02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:17 2005
(155 letters)
>mm_chr13_8234991_8235545
Length = 555
Score = 286 bits (148), Expect = 4e-82
Identities = 151/152 (99%)
Strand = Plus / Plus
Query: 1 actgatgacaccatttgcaacctttggacctcaaaatatctataaaagaaaaatgtaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgatgacaccatttgcaacctttggacctcaaaatatctataaaagaaaaatgtaaga 260
Query: 61 taaaatattgaactccagacatgctaacttctaaacattttgtcttggtatgcaacttta 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaaatattgaactccagacatgctaacttctaaacattttgtcttggtatgcaacttta 320
Query: 121 ctttcttagagtcagacattagatttagtaat 152
||||||||||||||||||||||||||||||||
Sbjct: 321 ctttcttagagtcagacattagatttagtaat 352
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 155
Length of database: 555
Length adjustment: 8
Effective length of query: 147
Effective length of database: 547
Effective search space: 80409
Effective search space used: 80409
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
