Query= MSMg01no193_h22.b1 MSMg01no193_h22.b1 CHROMAT_FILE:
MSMg01no193_h22.b1 PHD_FILE: MSMg01no193_h22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:56 2005
(687 letters)
>mm_chr13_18399984_18401068
Length = 1085
Score = 1166 bits (603), Expect = 0.0
Identities = 663/684 (96%), Gaps = 4/684 (0%)
Strand = Plus / Minus
Query: 5 gaattcttgtgaagacccggattcgccagtcctttatcagaggctggaatccagctgagt 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 gaattcttgtgaagacttggattcgccagtcctttatcagaggctggaatccagctgagt 826
Query: 65 ttgtgtttgacccaccctctgaattcccttggcaaggatctgcaggaaattttaatgaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 ttgtgtttgacccaccctctgaattcccttggcaaggatctgcaggaaattttaatgaca 766
Query: 125 gttgtatggctaaaatgtatccaagaaagaactttaattggacttggggaatagccatat 184
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||
Sbjct: 765 gttgtatggctaaaatgtatccaagaaagaactttaattggtcttggagaatagctatat 706
Query: 185 gaacaccggtcagatgtgagtctgtactgaccaggctaaggggttcaaagtcatgataaa 244
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 gaacactggtcagatgtgagtctgtactgaccaggctaaggggttcaaagtcatgataaa 646
Query: 245 catgaccgtatcccaaaaggatgtaatacaggttgaacatccctaataaaagactccaaa 304
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 645 catgaccgtatcccaaaaggatgtaatacaggttgaacatccctaatataagactccaaa 586
Query: 305 atgctcgaaaatctgattattaacacaactctttaaatggaaatttcagcaaactgacat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 atgctcgaaaatctgattattaacacaactctttaaatggaaatttcagcaaactgacat 526
Query: 365 actaaaaatatcgtataaaattgccttctggctaagtgtacagggtagatgggaaacaaa 424
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 actaaaaataccatataaaattgccttctggctaagtgtacagggtagatgggaaacaaa 466
Query: 425 ttaattccatgtttaaactagggtcctgttccaagtgtctcattatagcagagagacatg 484
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 465 ttaattccatgtttaaactagggtcctgttccaagtgtctcattatagc--agagacatg 408
Query: 485 aacagtagtaaaactttttttactttgggatatgggatacgagatgcacaagattcatca 544
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 407 aacagtagtaaaac-tgttttactttgggatatgggatacgagatgcacaagattcacca 349
Query: 545 caaa-cctgccgaacgatccaactgccccagtcaaccacagcagggccatactcagacta 603
|||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 348 caaaggctgccgaacgatccaactgccccagtcaaccacagcaggaccatactcagacca 289
Query: 604 tgctctctgtcccacccatcaggttctgcaggaattactcttaccccagccctggctttg 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tgctctctgtcccacccatcaggttctgcaggaattactcttaccccagccctggctttg 229
Query: 664 gncctctgcatttccctgtaatga 687
| |||||| ||||||||||||||
Sbjct: 228 gccctctgtgtttccctgtaatga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1085
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1075
Effective search space: 727775
Effective search space used: 727775
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no193_h22.g1 MSMg01no193_h22.g1 CHROMAT_FILE:
MSMg01no193_h22.g1 PHD_FILE: MSMg01no193_h22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:56 2005
(658 letters)
>mm_chr13_18312307_18313364
Length = 1058
Score = 1226 bits (634), Expect = 0.0
Identities = 652/658 (99%)
Strand = Plus / Plus
Query: 1 caaaaataaaacaaaaacaaaagaagtttgtgaggcagtgagcagatgacgttttgataa 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 201 caaaaataaaacaaaaacaaaagaagtttgtgaggcagtgagcagatgaggttttgatga 260
Query: 61 cagattccactgtacaaattgcttaagggcttcacacagaacttcccacctgaggaaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagattccactgtacaaattgcttaagggcttcacacagaacttcccacctgaggaaagg 320
Query: 121 agctagaaggatcggagtatcctcttagcagagcttccttagtcaaaatgagggttgagg 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agctagaaggatcggagtgtcctcttagcagagcttccttagtcaaaatgagggttgagg 380
Query: 181 atcctcaacacttaccacaaggaccaagctgacgtgagacctaaatcagccaccctaccc 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 atcctcaacacttaccacaaggaccaagctgatgtgagacctaaatcagccaccctaccc 440
Query: 241 gtgcctagaccagaggctcacttggatcccaatacagagccctagttagagaccctcaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgcctagaccagaggctcacttggatcccaatacagagccctagttagagaccctcaga 500
Query: 301 gccagtcccccaacggatgcctgcttataagcaccttacctacctcaccagcatggaact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gccagtcccccaacggatgcctgcttataagcaccttacctacctcaccagcatggaact 560
Query: 361 gtagagaatcacactcagaactccagagctgccccacaacttgacaagttgaagtaacag 420
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtagagaatcacactcagaattccagagctgccccacaacttgacaagttgaagtaacag 620
Query: 421 aaaagcaaacaaaaatctaactgaccaccatccaaaggcaagatcaaatatccataccaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaagcaaacaaaaatctaactgaccaccatccaaaggcaagatcaaatatccataccaa 680
Query: 481 gaaaatactggaaattacctaactccctatgccaagatcccatccctaatccacaaaaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaaaatactggaaattacctaactccctatgccaagatcccatccctaatccacaaaaac 740
Query: 541 attaaccagaacaataaatgtatactccagaaactaggaccctgaacctaatatactctg 600
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atgaaccagaacaataaatgtatactccagaaactaggaccctgaacctaatatactctg 800
Query: 601 agaaaagaaatttagctgatatacgagaacttcaaaatagcaattataaacttgttta 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 agaaaagaaatttagctgatatacgagaacttcaaaatagcaattataaacttgttta 858
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
