Query= MSMg01no196_g02.b1 MSMg01no196_g02.b1 CHROMAT_FILE:
MSMg01no196_g02.b1 PHD_FILE: MSMg01no196_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:54 2005
(641 letters)
>mm_chr13_93172626_93173666
Length = 1041
Score = 1151 bits (595), Expect = 0.0
Identities = 628/645 (97%), Gaps = 11/645 (1%)
Strand = Plus / Minus
Query: 5 gaattcactgagaaacgaagaaagaagcatgggcgagcttattttttgttttgcttttgt 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 gaattcactgagaaaggaagaaagaagcatgggcgagcttattttttgttttgcttttgt 801
Query: 65 gttttgaggcaggtactcactatgaggctctagctgccctcaaacacaagatcctcctgc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gttttgaggcaggtactcactatgaggctctagctgccctcaaacacaagatcctcctgc 741
Query: 125 ttcagcctcttttgcgttggtaacatgatgtcaccaacacctggccttaggaaagttatc 184
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ttcagcctcttttgcattggtaacatgatgtcaccaacacctggccttaggaaagttatc 681
Query: 185 catctttctcctgacaattgccagttctagaacactgtcccctccccagccctgttttca 244
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 680 catctttctcctgacaattgccagttctagaacactgtccccaccccagccctgttttca 621
Query: 245 ttttgaatattccagacatgaagagaagcttacagagcactgtgatggcatctgtctatg 304
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttttgaatattccagacacgaagagaagcttacagagcactgtgatggcatctgtctatg 561
Query: 305 gttggtatcagtttctccaaagtacacaaccaatagtgtgacctgagacctgattgatgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gttggtatcagtttctccaaagtacacaaccaatagtgtgacctgagacctgattgatgg 501
Query: 365 cttcattcgaattggttcattgaatcacagagtctgtgaagtatgaagaccaccacagac 424
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctgcattcgaattggttcattgaatcacagagtctgtgaagtatgaagaccaccacagac 441
Query: 425 acccgcccacctagagcgctcagagaacctgtgagttctctttagcttgagctcaaggac 484
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 acccacccacctagagcgctcagagaacctgtgagttctctttagcttgagctcaaggac 381
Query: 485 ctgagaactgagagagaatcagatgtctctctctctctggctgccagctggttggacaaa 544
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 380 ctgagaactgagagagaatcagatg--tctctctctctggctgccagctggttggacaaa 323
Query: 545 gtctactcacattggaatgaacaatctgttttaccc---------agctacatgctattg 595
|||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 322 gtctactcacattggaatgaacaatctgttttacccagcatactgagctacatgctattg 263
Query: 596 tcattgaaaaacatctttacatgggtatgtagaatgttttagtct 640
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tcattgaaaaacatctttacatgggtatgtagaatgttttagtct 218
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space: 650561
Effective search space used: 650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no196_g02.g1 MSMg01no196_g02.g1 CHROMAT_FILE:
MSMg01no196_g02.g1 PHD_FILE: MSMg01no196_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:55 2005
(638 letters)
>mm_chr13_93080713_93081750
Length = 1038
Score = 1187 bits (614), Expect = 0.0
Identities = 632/638 (99%)
Strand = Plus / Plus
Query: 1 atttttacctcatagttctgtttccctggaaactataaaagtggaggcagcaccatctcc 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 atttttacctcatagttctgtttccctggaaactctaaaagtggaggcagcaccatctcc 260
Query: 61 agtaagaactctttgaagtcagtgagttacacttggcttagaaagaaacatactcagacc 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtaagaattctttgaagtcagtgagttacacttggcttagaaagaaacatactcagacc 320
Query: 121 cagggtgctgacctttcctgagtgtcctgactcttacactctgccaagctccttcagaga 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 cagggtgctgacctttcctgagtgccctgactcttacactctgccaagctccttcagaga 380
Query: 181 ctgcgtggaaagactcctcaagagcctgaaacccctaaaccagggcaactcacacccaca 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgcgtggaaagattcctcaagagcctgaaacccctaaaccagggcaactcacacccaca 440
Query: 241 gataagactctgtcacctggggaaagaaaacgtaagccccactgatgccttggacttccc 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 gataagactctgtcacctggggaaagaaaacttaagccccactgatgccttggacttccc 500
Query: 301 taaaggctgctgtgagcacggctcacactgaggacgcatgctcagtaggcaggccacttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taaaggctgctgtgagcacggctcacactgaggacgcatgctcagtaggcaggccacttt 560
Query: 361 caatgccacaacctttcagttaatttgtggcccagaaatacttgtgatgtcttaggatgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caatgccacaacctttcagttaatttgtggcccagaaatacttgtgatgtcttaggatgt 620
Query: 421 gtttaactgagctgaagatgcagtcttgatgctaggccatgctgctttcagatgcaggat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtttaactgagctgaagatgcagtcttgatgctaggccatgctgctttcagatgcaggat 680
Query: 481 acagtctctgacattcactaaacgggatttagaggcgatggaaatgacagtaagccttga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acagtctctgacattcactaaacgggatttagaggcgatggaaatgacagtaagccttga 740
Query: 541 acaggagacagggatagggctgatagtaagtaatctacagcgtgtggcacagagaggcca 600
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 741 acaggagacagggatagggctgatagtaagtactctacagcgtgtggcacagagaggcca 800
Query: 601 agtttgtcctgacaggacaggaagtgcctttccacctt 638
||||||||||||||||||||||||||||||||||||||
Sbjct: 801 agtttgtcctgacaggacaggaagtgcctttccacctt 838
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
