Query= MSMg01no201_c16.b1 MSMg01no201_c16.b1 CHROMAT_FILE:
MSMg01no201_c16.b1 PHD_FILE: MSMg01no201_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:21:07 2005
(649 letters)
>mm_chr13_31472111_31473159
Length = 1049
Score = 1141 bits (590), Expect = 0.0
Identities = 635/650 (97%), Gaps = 2/650 (0%)
Strand = Plus / Plus
Query: 1 tgcagggtctcatgccgaagaaatcaggatggcaggatcttgaggcagttgtttacagct 60
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcagggtctcatgaagaagaaatcaggatggcaggatcttgaggcagttgtttacagct 260
Query: 61 aggaagtggagagagatgaatgtgggtgtcagctcactttcttctttttaaaagtctaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggaagtggagagagatgaatgtgggtgtcagctcactttcttctttttaaaagtctaag 320
Query: 121 accccagtccacagattgttgccaccaacagttaaggcggctcttcccagctcagttcat 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accccagtccacagattgtggccaccaacagttaaggcggctcttcccagctcagttcat 380
Query: 181 ttaatttaggcaatccctataggca-agctcaggtgcttatctcctaggtaactctagct 239
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 381 ttaatttaggcaatccctataggcaca-ctcaggtgcttatctcctaggtaactctagct 439
Query: 240 tatgtcaagtcaacagcatcagccaatctaggatcctgttttttctgctccatcctgtgt 299
||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||
Sbjct: 440 tatgtcaagtcaacagcatcagccagtctaggatcctgctccatctgctccatcctgtgt 499
Query: 300 ccatacaaacatgtgtcatgttagtcaattttgactgtttccaaacacttttattatttt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ccatacaaacatgtgtcatgttagtcaattttgactgtttccaaacacttttattatttt 559
Query: 360 acgtggtgaggctctcaactgtgtgcaatatgaagaatgctgcatccttactgagagcta 419
|| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 560 acttggtgaggctctcaactgtgtgcaatatgaagaatcctgcacccttactgagagcta 619
Query: 420 tacagtcatctgtggggcatgatttctgaacatttgaccagttgagcaagatgatttctt 479
|||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 620 tacagtcatctgtgaggcatgatttctggacatttgaccagttgagcaagatgatttctt 679
Query: 480 ttggtactgtttttccagcagaaacagtaactagataacttattttatttaatttaaaaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ttggtactgtttttccagcagaaacagtaactagataacttattttatttaatttaaaaa 739
Query: 540 tatacttacaaggctggagaggtaccttagtagttaatcttagtggttaagagcactagc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tatacttacaaggctggagaggtaccttagtagttaatcttagtggttaagagcactagc 799
Query: 600 tgctcttccagaggtcctgagtttaattctcaacaaccacatggaggctc 649
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tgctcttccagaggtcctgagtttaattctcaacaaccacatggaggctc 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no201_c16.g1 MSMg01no201_c16.g1 CHROMAT_FILE:
MSMg01no201_c16.g1 PHD_FILE: MSMg01no201_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:21:07 2005
(225 letters)
>mm_chr13_31583398_31584022
Length = 625
Score = 416 bits (215), Expect = e-121
Identities = 218/219 (99%)
Strand = Plus / Minus
Query: 1 gcctgatctaaactggatgacccagaggacttgtgtatactcagagccgcaggtggttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gcctgatctaaactggatgacccagaggacttgtgtatactcagagccgcaggtggttgg 360
Query: 61 agtaggggctgctgtgtgaggtcccgagatgcacctcagtgcctagcacctataggcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 agtaggggctgctgtgtgaggtcccgagatgcacctcagtgcctagcacctataggcatt 300
Query: 121 ggcagggacttcctgttgtgctgaccctggtaaatgtctgcagactggctgtctttgcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ggcagggacttcctgttgtgctgaccctggtaaatgtctgcagactggctgtctttgcaa 240
Query: 181 gtgcatcttctccatgtaacagatgggctcaggagctat 219
||||||| |||||||||||||||||||||||||||||||
Sbjct: 239 gtgcatcatctccatgtaacagatgggctcaggagctat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 225
Length of database: 625
Length adjustment: 9
Effective length of query: 216
Effective length of database: 616
Effective search space: 133056
Effective search space used: 133056
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
