| Query= MSMg01no201_h15.g1 MSMg01no201_h15.g1 CHROMAT_FILE:
MSMg01no201_h15.g1 PHD_FILE: MSMg01no201_h15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:21:41 2005
(620 letters)
>mm_chr13_42433807_42434826
Length = 1020
Score = 1106 bits (572), Expect = 0.0
Identities = 604/620 (97%), Gaps = 9/620 (1%)
Strand = Plus / Minus
Query: 1 tctctcttcttcaggtagtggaaaccaccaatatatggctatcctagtgagccatgaaaa 60
|||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 616 tctctcttcttcaggtagtggaaaccaccaatatatggctatattagtgagtcatgaaaa 557
Query: 61 tatgcttcctctcactacctgaaaacagtaatggtaaagttagaatagagaaaggcacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tatgcttcctctcactacctgaaaacagtaatggtaaagttagaatagagaaaggcacct 497
Query: 121 tccagggctgtgattggagatgcaagggtaggaaggatggcagcgttaggcattgggcaa 180
||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 496 tccagggctgtgattggagatgcaagggtaggaagaatggtagcgttaggcattgggcaa 437
Query: 181 ccccattagagttacccatgggccaccaactgaccaagggacattcatatagacctttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 436 ccccattagagttacccatgggccaccaactgaccaagggacattcatatagaccttccc 377
Query: 241 cctctggcactaaagacctaacacaaagggagctctggtcacagttcaggggcacaaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 cctctggcactaaagacctaacacaaagggagctctggtcacagttcaggggcacaaata 317
Query: 301 aaatataattgccataaaaacatgtcagttcatatgaacaagtgaagctattgaggttca 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 316 aaatataattgccataaaaacatgtcagttcatatgaataagtgaagctattgaggttca 257
Query: 361 agtcccagaagttctgggaaggtgaagtatataatacttcttgaatggataaaaaaagaa 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 agtcccagaagttctgggaaggtgaagtatataatacttcttgaatggataaaaa----- 202
Query: 421 atatatatatatatatatatatatatatatatatatatatatatatccctccaccttcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ----atatatatatatatatatatatatatatatatatatatatatccctccaccttcct 146
Query: 481 tcttgatgtaatttggtagatgccatgcttctcaactacatccttttaggttccaaagcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tcttgatgtaatttggtagatgccatgcttctcaactacatccttttaggttccaaagcc 86
Query: 541 tgaaaggttaaagacataaagccaatgtgatatgaaaaagagattatttctgagaccaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 tgaaaggttaaagacataaagccaatgtgatatgaaaaagagattatttctgagaccaac 26
Query: 601 ttgctaaaagattgcttcat 620
||||||||||||||||||||
Sbjct: 25 ttgctaaaagattgcttcat 6
Score = 81.9 bits (42), Expect = 1e-19
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 421 atatatatatatatatatatatatatatatatatatatatat 462
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 atatatatatatatatatatatatatatatatatatatatat 201
Score = 81.9 bits (42), Expect = 1e-19
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 423 atatatatatatatatatatatatatatatatatatatatat 464
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 atatatatatatatatatatatatatatatatatatatatat 201
Score = 81.9 bits (42), Expect = 1e-19
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 425 atatatatatatatatatatatatatatatatatatatatat 466
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 atatatatatatatatatatatatatatatatatatatatat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 102
Number of extensions: 36
Number of successful extensions: 35
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 8
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space: 616100
Effective search space used: 616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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