Query= MSMg01no203_g08.b1 MSMg01no203_g08.b1 CHROMAT_FILE:
MSMg01no203_g08.b1 PHD_FILE: MSMg01no203_g08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:24:32 2005
(373 letters)
>mm_chr13_88324075_88324845
Length = 771
Score = 609 bits (315), Expect = e-179
Identities = 354/367 (96%), Gaps = 4/367 (1%)
Strand = Plus / Plus
Query: 4 ggaattcatagtcctagccatactacactttggaagttatgtagcccatgaggtatcatg 63
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatagtccaaggcatactacactttggaagttatgtagcccatgaggtatcatg 263
Query: 64 ctcatttcatgaacccgctttacaaagttgtcattcagagcagtgccagctcagacatca 123
||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 264 ctcatttcaggaatgggctttacaaa-ttgtcattcagagcagtgccagctcagacatca 322
Query: 124 aagatggaagagtaggtgtcactgttaaattttcaggaaacatcctgggcctggtgtagt 183
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 323 aagatggaagagtaggtgtcactgttaaagtttcaggaaacatcctgggcctggtgtagt 382
Query: 184 tcaaaatgtcctttagtgggccactca-gatgttgcttcaccactaccttcatgtcatac 242
|||||||||||||||||||| |||||| | ||||||||||||||| ||||||||||||||
Sbjct: 383 tcaaaatgtcctttagtggg-cactcatg-tgttgcttcaccactcccttcatgtcatac 440
Query: 243 ttgtaagctttctacaggcagtatgtcagactcatgatgaacacattgtgggtaggaaca 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgtaagctttctacaggcagtatgtcagactcatgatgaacacattgtgggtaggaaca 500
Query: 303 cagaagtctatgctggttagcttccccttcaactctgggatgatctttccgcagccttgg 362
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 cagaagtctatgctggttagcttccccttcaactctgagatgatctttccgcagccttgg 560
Query: 363 aagcatc 369
|||||||
Sbjct: 561 aagcatc 567
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 771
Length adjustment: 9
Effective length of query: 364
Effective length of database: 762
Effective search space: 277368
Effective search space used: 277368
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no203_g08.g1 MSMg01no203_g08.g1 CHROMAT_FILE:
MSMg01no203_g08.g1 PHD_FILE: MSMg01no203_g08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:24:32 2005
(341 letters)
>mm_chr13_88407636_88408376
Length = 741
Score = 553 bits (286), Expect = e-162
Identities = 325/338 (96%)
Strand = Plus / Minus
Query: 4 aatgatgatctattcaataagatcttcaaaatagaattcacatgtgcatacgtgtttgtg 63
|||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aatggtgatctatttaataaaatcttcaaaatagaattcacatgtgcatacgtgtttgta 482
Query: 64 tttataaataagttaagtgtgtacaaaagggagacagcatatgtttattttcattgagtc 123
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 481 tttataaataagttaagtgtgtacaaaagggagacagcatatatttattttcattgagtc 422
Query: 124 atcatagaaacacagatacacatcatacctaagcttgagttcagtagaagagggggtgga 183
||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 421 atcatagaagcacagatacacatcatacctaagcttgaattcagtagaagagggggttga 362
Query: 184 gcttctgaaagcaataattatagatgacaatttagagaaaactggtaattccataatttg 243
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 361 gcttctgaaagcaatagttatagatgacaatttagagaaaactggtaattccataacttg 302
Query: 244 gttgtaagaagtcataccaattttcacaaaatactgagaaatgtatcatttttccataga 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 301 gttgtaagaagtcataccaattttcacaaaatactgagaaatgtatcatttttccacaga 242
Query: 304 gccatcaattggacttttagcatatacattgtgaaatg 341
|||| ||||| |||||||||||||||||||||||||||
Sbjct: 241 gccaacaatttgacttttagcatatacattgtgaaatg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
