Query= MSMg01no207_d01.b1 MSMg01no207_d01.b1 CHROMAT_FILE:
MSMg01no207_d01.b1 PHD_FILE: MSMg01no207_d01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:29:48 2005
(332 letters)
>mm_chr13_19813806_19814537
Length = 732
Score = 634 bits (328), Expect = 0.0
Identities = 331/332 (99%)
Strand = Plus / Plus
Query: 1 cgcatgagaacacctggaagtgctttcccacatttccttcagtgatggaatgtgatgtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cgcatgagaacacctggaagtgctttcccacatttccttcagtgatggaatgtgatgtgt 260
Query: 61 cagggtaagccaaatagacccttgcctctcctagttgtttttgtcaacgttctatacact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagggtaagccaaatagacccttgcctctcctagttgtttttgtcaacgttctatacact 320
Query: 121 ttactagaactaagtagcatacaaagagtaaatgttatcatagtaaacttatagagcctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttactagaactaagtagcatacaaagagtaaatgttatcatagtaaacttatagagcctt 380
Query: 181 tgtgatgtgctgcccactgctttttgtaccatgtataagcatgccatttttatctcagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgatgtgctgcccactgctttttgtaccatgtataagcatgccatttttatctcagtt 440
Query: 241 atctgacattatttatttgcacaatgttgggggaggggacagcaagcaccctccccaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 atctgacattatttatttgcacaatgttgggggaggggacagcaagcaccctcccaaaaa 500
Query: 301 aacaaaaacaaaaatttctgtagagaaagttt 332
||||||||||||||||||||||||||||||||
Sbjct: 501 aacaaaaacaaaaatttctgtagagaaagttt 532
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no207_d01.g1 MSMg01no207_d01.g1 CHROMAT_FILE:
MSMg01no207_d01.g1 PHD_FILE: MSMg01no207_d01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:29:48 2005
(384 letters)
>mm_chr13_19963402_19964185
Length = 784
Score = 574 bits (297), Expect = e-168
Identities = 303/305 (99%), Gaps = 1/305 (0%)
Strand = Plus / Minus
Query: 1 tgaccctctatctccagtacctagcaacagtcaattacttctcaggtaggaatgggactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tgaccctctatctccagtacctagcaacagtcaattacttctcaggtaggaatgggactt 245
Query: 61 tggtcccacccccactctctaggctgtgatgtgtgtggtctgtggaaatggacctcagtc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 244 tggtcccacccccactctctaggctgtgatgtgtgtggtctgtggaaatgga-atcagtc 186
Query: 121 tagctgcctatcaatgggataatgaaaatgtgctacagttttatatgatggaatatcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tagctgcctatcaatgggataatgaaaatgtgctacagttttatatgatggaatatcatt 126
Query: 181 ggtctgttaataaaaatgaaatcatgaagttttcaggtaaatagaactggaaacaatttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ggtctgttaataaaaatgaaatcatgaagttttcaggtaaatagaactggaaacaatttt 66
Query: 241 ttctcagacgtccccataataagcacatgttttctctcatttgaggatattagctttgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 ttctcagacgtccccataataagcacatgttttctctcatttgaggatattagctttgaa 6
Query: 301 tctta 305
|||||
Sbjct: 5 tctta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
