Query= MSMg01no211_c09.b1 MSMg01no211_c09.b1 CHROMAT_FILE:
MSMg01no211_c09.b1 PHD_FILE: MSMg01no211_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:36:03 2005
(345 letters)
>mm_chr13_27476726_27477470
Length = 745
Score = 445 bits (230), Expect = e-129
Identities = 288/338 (85%), Gaps = 48/338 (14%)
Strand = Plus / Minus
Query: 1 ttcttctcttatctccaaagccagagaaattcaggcaaaatttgatgaactcacgacagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ttcttctcttatctccaaagccagagaaattcaggcaaaatttgatgaactcacgacagg 279
Query: 61 tgttaaaatagttcaaagcatggtgagtagtcttctgaaaagcttattagcttttttcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tgttaaaatagttcaaagcatggtgagtagtcttctgaaaagcttattagcttttttcat 219
Query: 121 gcttaaatgctatactat------------cacacacacacacacacacacacacacaca 168
|||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 218 gcttaaatgctatactatcacacacacacacacacacacacacacacacacacacacaca 159
Query: 169 cacacacgtgtgtgtg------------------------------------tatatata 192
||||||||||||| || ||||||||
Sbjct: 158 cacacacgtgtgtatgtatatatatatatatatatatatatatatatatatatatatata 99
Query: 193 tatatacaatgattaaaattgtgagtcaatcagatcataaccacaaccggtcaaaatgca 252
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 98 tatatacaatgattaaaattgtgagtcaaacagatcataaccacaaccggtcaaaatgca 39
Query: 253 tcattgtgagagcaagtcctagtagatacatctacaaa 290
||||||||||||||||||||||||||||||||||||||
Sbjct: 38 tcattgtgagagcaagtcctagtagatacatctacaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 59
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no211_c09.g1 MSMg01no211_c09.g1 CHROMAT_FILE:
MSMg01no211_c09.g1 PHD_FILE: MSMg01no211_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:36:03 2005
(332 letters)
>mm_chr13_27310930_27311660
Length = 731
Score = 615 bits (318), Expect = e-180
Identities = 327/330 (99%), Gaps = 1/330 (0%)
Strand = Plus / Plus
Query: 1 tttaaatttgattgatttgctacattagagatcagacttttgggggattcttctctggag 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 tttaaatttgattgatttgctacattagagatcagtcttttgggggattcttctctggag 260
Query: 61 acacattacaatccccagattcactttgcttagtctttgttgctgttaagtataaaagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acacattacaatccccagattcactttgcttagtctttgttgctgttaagtataaaagag 320
Query: 121 aacagtactacaggcttctagggactgaagagtgtatttcacatgatgctttccagaaaa 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacagtagtacaggcttctagggactgaagagtgtatttcacatgatgctttccagaaaa 380
Query: 181 aaaaaaagtcgaaatgacaaagctgttgtaattgtgaaattgagaaacttaattaagaaa 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaaa-gtcgaaatgacaaagctgttgtaattgtgaaattgagaaacttaattaagaaa 439
Query: 241 ttgaactcattgagaacaggagatcaagggttccccttgttcccacttaggaagacagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttgaactcattgagaacaggagatcaagggttccccttgttcccacttaggaagacagaa 499
Query: 301 tttataattatttgtgttgccaggttttga 330
||||||||||||||||||||||||||||||
Sbjct: 500 tttataattatttgtgttgccaggttttga 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 731
Length adjustment: 9
Effective length of query: 323
Effective length of database: 722
Effective search space: 233206
Effective search space used: 233206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
