Query= MSMg01no213_p14.b1 MSMg01no213_p14.b1 CHROMAT_FILE:
MSMg01no213_p14.b1 PHD_FILE: MSMg01no213_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:09 2005
(319 letters)
>mm_chr13_97159339_97160057
Length = 719
Score = 603 bits (312), Expect = e-177
Identities = 312/312 (100%)
Strand = Plus / Minus
Query: 4 ggaattcacaatggctaggatgtgcctttgcctgtattacaagcataggctggagattta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ggaattcacaatggctaggatgtgcctttgcctgtattacaagcataggctggagattta 456
Query: 64 gactgaggaggcattgacctcttggggtaatacgaaagaaatggggatggatgggattcc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gactgaggaggcattgacctcttggggtaatacgaaagaaatggggatggatgggattcc 396
Query: 124 ccattgtggtaaaagaactgctatcctgcagaccaaacacaactgcacacacttttagaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ccattgtggtaaaagaactgctatcctgcagaccaaacacaactgcacacacttttagaa 336
Query: 184 tataaacatatgtattttctagaaggatttttagattcaaacatgatttcaaaggagttc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tataaacatatgtattttctagaaggatttttagattcaaacatgatttcaaaggagttc 276
Query: 244 ataatcctaacagaggactgctctgagaagaggaacctaaaactgctagcttttaaggaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ataatcctaacagaggactgctctgagaagaggaacctaaaactgctagcttttaaggaa 216
Query: 304 cagtgaagtgtc 315
||||||||||||
Sbjct: 215 cagtgaagtgtc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no213_p14.g1 MSMg01no213_p14.g1 CHROMAT_FILE:
MSMg01no213_p14.g1 PHD_FILE: MSMg01no213_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:09 2005
(291 letters)
>mm_chr13_97044413_97045106
Length = 694
Score = 536 bits (277), Expect = e-157
Identities = 289/295 (97%), Gaps = 5/295 (1%)
Strand = Plus / Plus
Query: 1 ctaccagataatgagctagcttgataacgtcagagatcaaagagaaaggctctgcacagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 ctaccagataatgagctagcttgataacgtcagagatcaaagagaaaggct-tgcacagt 259
Query: 61 tctgcacacagaatcatagctttactgtggcagcaacagactatatggaaaacagatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tctgcacacagaatcatagctttactgtggcagcaacagactatatggaaaacagatttt 319
Query: 121 acagtttggaaaccatcagaggcaagacagagccttacagttctagtgaaatcctaagtc 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 320 acagtttggaaaccatcagaggcaagacagagtcttacagttctagtgaaatcctaagtc 379
Query: 181 caaagaacaagaaacaaatggaaataaaacccatgacaaatgggaaaattgaagggtgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caaagaacaagaaacaaatggaaataaaacccatgacaaatgggaaaattgaagggtgca 439
Query: 241 tgtcacatggac----gcacagaaagcgaaggtgggaaaatgaccagctcttcct 291
|||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgtcacatggacagaagcacagaaagcgaaggtgggaaaatgaccagctcttcct 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 694
Length adjustment: 9
Effective length of query: 282
Effective length of database: 685
Effective search space: 193170
Effective search space used: 193170
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
