Query= MSMg01no216_n07.b1 MSMg01no216_n07.b1 CHROMAT_FILE:
MSMg01no216_n07.b1 PHD_FILE: MSMg01no216_n07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:00 2005
(231 letters)
>mm_chr13_7058292_7058922
Length = 631
Score = 431 bits (223), Expect = e-125
Identities = 229/231 (99%)
Strand = Plus / Plus
Query: 1 tgcacattttgcattaatcatacacgcatggcacttcctgtttaatcgcttggcaattat 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 tgcacattttgcattaatcatacacgcatggcacttcctgtttaatcacttggcaattat 260
Query: 61 ctggtttatatcttctgttttcatcttctaaacaagatttgcctcatcagatcttacaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctggtttatatcttctgttttcatcttctaaacaagatttgcctcatcagatcttacaat 320
Query: 121 tgcatttgacatggtgacgaatagttgaattatttgttccctacaaatgtaattatttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcatttgacatggtgacgaatagttgaattatttgttccctacaaatgtaattatttac 380
Query: 181 catgtaatttccagtaagacacagcttccaagtgttcatataagattcact 231
|||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 catgtaatttccaggaagacacagcttccaagtgttcatataagattcact 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 631
Length adjustment: 9
Effective length of query: 222
Effective length of database: 622
Effective search space: 138084
Effective search space used: 138084
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no216_n07.g1 MSMg01no216_n07.g1 CHROMAT_FILE:
MSMg01no216_n07.g1 PHD_FILE: MSMg01no216_n07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:00 2005
(287 letters)
>mm_chr13_7212299_7212985
Length = 687
Score = 501 bits (259), Expect = e-146
Identities = 280/287 (97%), Gaps = 2/287 (0%)
Strand = Plus / Minus
Query: 1 tccgttaaagacccagtgagcaatgcagaacttactaagcacaaggacaaagacctcagt 60
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 486 tccgttaaagacccagtgagcaatgcagaatttactaagcacaaggacaaagacctcaat 427
Query: 61 tgggcaattactactgaaactgttcagctactttgagttcatttctcagcaataagtatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tgggcaattactactgaaactgttcagctactttgagttcatttctcagcaataagtatc 367
Query: 121 aacaataaagtgccttgttcatactgatgactacatagtggtggtaagaactatttttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aacaataaagtgccttgttcatactgatgactacatagtggtggtaagaactatttttgc 307
Query: 181 ttcatggtatcctcttttc-aaaatttacaaaaaaaatctataagtaataaccataattt 239
||||||||||||||||||| ||||||||| ||||||||||| ||||||||| ||||||||
Sbjct: 306 ttcatggtatcctcttttcaaaaatttac-aaaaaaatctacaagtaataagcataattt 248
Query: 240 agaagctaatttaaaatatcttttaaaatcaacatgccacattctta 286
||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 247 agaagctaatttaaaatatctttcaaaatcaacatgccacattctta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
