AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCAATTAAACTTAATCAAATTACACATCTCTATTTTAGAATTGTGTTGAA
TATTTGAGAGCAAAAAAAAAAAAAAAAAAAAGAGGTACAGGGATAAATGT
GTCCATGTATATTCCAAACATTGTAACCCTTGGCTCACCAATGTAAAGGA
AACCCAGATTGAGAGCTATCAACACAGACACACACACAGGAAAATCCAAT
CTTCCTTGCCCCTTCATCTTGAAGCTACACATGCAAACAGAATAACTGTT
TTACAGAAGTGTTGTTAAACATTGGTACCCAAATTCCATTTCATTTCACC
TTCAGTGGGTTTGTGGTGGTTTCCCNNAACCATGCCCTGGGTTCGTTGGA
GATAATATGATACAGGGCTCGAACCCCACAAAGAAAAACAAACAGGTCAT
CTTGTCAAAGCTTTATGTGGGAGCCAATTACATTAATTTTCCACAGCAGC
CAAATACATATTTCATTTCCATCTCCCACCAGAGATGGGTTCCAGGGATC
CTGTTTCGAAAGGCTCTTTATCACTAAGTAACATTCAGACCCCCACAGGA
AACCCCGTGGCAGCCGGTGGCCCATTTGATGTAACTGAATCGAGGCGCCA
TTCTGTCTGCACGTTGTTCGGGAATAAAACCCTTTAGGAAAAAAGGGGGT
TTCTTGGGTCAGACCTATTTGGCCACTAAATTTTT

NNTTCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTATGTGACCTTTTTCC
CCACGAGAAGTGAAGTTTGGGAGATGAAGTCATTTGATGGCCAATTACTA
TAACTATTCAAAAGTCTGTATTTTATAAGATTTTTTTTTAAAGAGGCTGC
TCTGAACCCAAGTCTTCCCATTGCACAGTCGCTTGGGCCTAAGNNGTTTG
GCTGGAGAGATGAACACTAAAGGCTGATTTTGCTAGTTTGTTCAGTTGAG
ACTGGCTGAATTATTATTATTTTGTTGTTGTTGTTGTTGCTGTGTAAACT
TCTTCTTTGGAACCTAAATAAAATGAAAGCTTAACGCACGCTCTACCGCA
ACATCTTTGAGGGACAACCGAGAGTAAACAGCCAATCAGGAAACAAGCCC
TAACTTGAATAAAGAGCGGGGCAGGCCCCATCCTGGTTTCTGTTTTCGGG
AAAACTTTACCAAATTAAAAACCCTCCTTGGGAGAAACAGTGGCCCCCCG
AATGGGACCCGAAATTTGGTGGAAAAAAGGGGGGGGGGGGCCTAAACGTG
GGTGGGGAAAACCCCAAAAAAAAGGGGGGGGAAAAAAAAACCTCCCAATT
TCTTCAAAAAAAAGGGGGGTTATAATATCCCCTCGGGGAGGAATTTATCG
GGG

Query= MSMg01no218_d04.b1 MSMg01no218_d04.b1 CHROMAT_FILE:
MSMg01no218_d04.b1 PHD_FILE: MSMg01no218_d04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:46:08 2005
         (322 letters)



>mm_chr13_71278019_71278740
          Length = 722

 Score =  605 bits (313), Expect = e-178
 Identities = 316/317 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaattaaacttaatcaaattacacatctctattttagaattgtgttgaatatttg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gaattcaattaaacttaatcaaattacacatctctattttagaattgtgttgaatatttg 547

                                                                       
Query: 65  agagcaaaaaaaaaaaaaaaaaaaagaggtacagggataaatgtgtccatgtatattcca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 agagcaaaaaaaaaaaaaaaaaaaagaggtacagggataaatgtgtccatgtatattcca 487

                                                                       
Query: 125 aacattgtaacccttggctcaccaatgtaaaggaaacccagattgagagctatcaacaca 184
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 aacattgtaactcttggctcaccaatgtaaaggaaacccagattgagagctatcaacaca 427

                                                                       
Query: 185 gacacacacacaggaaaatccaatcttccttgccccttcatcttgaagctacacatgcaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gacacacacacaggaaaatccaatcttccttgccccttcatcttgaagctacacatgcaa 367

                                                                       
Query: 245 acagaataactgttttacagaagtgttgttaaacattggtacccaaattccatttcattt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 acagaataactgttttacagaagtgttgttaaacattggtacccaaattccatttcattt 307

                            
Query: 305 caccttcagtgggtttg 321
           |||||||||||||||||
Sbjct: 306 caccttcagtgggtttg 290


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space:   223169
Effective search space used:   223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no218_d04.g1 MSMg01no218_d04.g1 CHROMAT_FILE:
MSMg01no218_d04.g1 PHD_FILE: MSMg01no218_d04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:46:08 2005
         (152 letters)



>mm_chr13_71223407_71223958
          Length = 552

 Score =  294 bits (152), Expect = 2e-84
 Identities = 152/152 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctatgtgacctttttccccacgagaagtgaagtttgggagatgaagtcatttgatggcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctatgtgacctttttccccacgagaagtgaagtttgggagatgaagtcatttgatggcc 260

                                                                       
Query: 61  aattactataactattcaaaagtctgtattttataagatttttttttaaagaggctgctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattactataactattcaaaagtctgtattttataagatttttttttaaagaggctgctc 320

                                           
Query: 121 tgaacccaagtcttcccattgcacagtcgctt 152
           ||||||||||||||||||||||||||||||||
Sbjct: 321 tgaacccaagtcttcccattgcacagtcgctt 352


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 152
Length of database: 552
Length adjustment: 8
Effective length of query: 144
Effective length of database: 544
Effective search space:    78336
Effective search space used:    78336
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)