Query= MSMg01no232_k13.b1 MSMg01no232_k13.b1 CHROMAT_FILE:
MSMg01no232_k13.b1 PHD_FILE: MSMg01no232_k13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:12 2005
(220 letters)
>mm_chr13_75353353_75353972
Length = 620
Score = 418 bits (216), Expect = e-121
Identities = 219/220 (99%)
Strand = Plus / Minus
Query: 1 ttaggtctagtgtgaatactgacactgtatgcttcctctatagacttctctgtacagata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ttaggtctagtgtgaatactgacactgtatgcttcctctatagacttctctgtacagata 361
Query: 61 tttatagcctgaagtcttctccaaacagagacttctcctaccaagattagctaaactttc 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tttatagcctgaaatcttctccaaacagagacttctcctaccaagattagctaaactttc 301
Query: 121 cttcttgtccagctgtacataataacctcacttcttgcttatctgaatgtaataacctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 cttcttgtccagctgtacataataacctcacttcttgcttatctgaatgtaataacctta 241
Query: 181 catcctttttcaattgtattaaataaacctgcatccctgt 220
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 catcctttttcaattgtattaaataaacctgcatccctgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 220
Length of database: 620
Length adjustment: 9
Effective length of query: 211
Effective length of database: 611
Effective search space: 128921
Effective search space used: 128921
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no232_k13.g1 MSMg01no232_k13.g1 CHROMAT_FILE:
MSMg01no232_k13.g1 PHD_FILE: MSMg01no232_k13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:12 2005
(661 letters)
>mm_chr13_75231753_75232812
Length = 1060
Score = 1239 bits (641), Expect = 0.0
Identities = 656/661 (99%), Gaps = 1/661 (0%)
Strand = Plus / Plus
Query: 1 tctgcctaaatagatgcccagcattaatgtaggaggaattcaaactaaaatcccttctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgcctaaatagatgcccagcattaatgtaggaggaattcaaactaaaatcccttctca 260
Query: 61 ttttcatggaagaatctgcacagagtagaagagtgttccagctatttttactcaaattgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttcatggaagaatctgcacagagtagaagagtgttccagctatttttactcaaattgt 320
Query: 121 ctcatgcaaatgaacagatggcttaattctcctcttcaattatttcactgaattttgggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcatgcaaatgaacagatggcttaattctcctcttcaattatttcactgaattttgggg 380
Query: 181 aaaccccaaagatacaacaaaagtataattattactcatcaataaaaatttattacaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaccccaaagatacaacaaaagtataattattactcatcaataaaaatttattacaagt 440
Query: 241 aggttatataatcttatgaacactttcccttaggataattttactgtaggagataccttg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 aggttatataatcttatgaacactttcccttaggataattttactgtaggagatacattg 500
Query: 301 gaatgctagaagcttgcattggacaagatggcatttaccgatttttgcagatccaaagca 360
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 501 gaatgctagaagcttgcattggacaagatggcatttagtgatttttgcagatccaaagca 560
Query: 361 ttatttacaatgaaacgcatgatactcattatgcacataatcagaaggcagtgacaattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttatttacaatgaaacgcatgatactcattatgcacataatcagaaggcagtgacaattt 620
Query: 421 tctccattccatttagtctgctcatctagagattaatatgcaattctggctaatgacatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctccattccatttagtctgctcatctagagattaatatgcaattctggctaatgacatt 680
Query: 481 aatcacagcgtggtttgctacaattggatgtttatctgatcaaatggcagtgccactttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aatcacagcgtggtttgctacaattggatgtttatctgatcaaatggcagtgccactttt 740
Query: 541 ttatgccatttaaaaaacctgctcttgatatttattttgctgcacttttataatggagga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttatgccatttaaaaaacctgctcttgatatttattttgctgcacttttataatggagga 800
Query: 601 aagtattcttttaaatatactccatgaaatgcaccaaaaagtccacatttacaggctgat 660
|| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 801 aaatattcttttaaatatactccatgaaatgcaccaaaa-gtccacatttacaggctgat 859
Query: 661 a 661
|
Sbjct: 860 a 860
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1060
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1050
Effective search space: 683550
Effective search space used: 683550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
