Query= MSMg01no234_i10.b1 MSMg01no234_i10.b1 CHROMAT_FILE:
MSMg01no234_i10.b1 PHD_FILE: MSMg01no234_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:51:32 2005
(317 letters)
>mm_chr13_60229933_60230650
Length = 718
Score = 553 bits (286), Expect = e-162
Identities = 307/314 (97%), Gaps = 1/314 (0%)
Strand = Plus / Minus
Query: 5 gaattcttcgaata-aatattgtcctggtttgtcatgaaactgctcagaattttccctaa 63
|||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 518 gaattcttcgaatacaatattgtcctggtttgtcatgaaactgctcagaattctccctaa 459
Query: 64 gaagataaaataaaactactgcataaatttaaataacattagtctcgttttgttacagtt 123
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gaagataaaataaaattactgcataaatttaaataacattagtctcgttttgttacagtt 399
Query: 124 tctttctcagtttgtgttatacacatgaacaaaaatgtctcttattatggaaaatattaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tctttctcagtttgtgttatacacatgaacaaaaatgtctcttattatggaaaatattaa 339
Query: 184 aatgttcactatcatcagacactatagagaaacattacagaaaaaaatgaaatgagacat 243
|||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 338 aatgttcactatcatcagacactagagagaaacattacagaaaaaaatgaaaggagacat 279
Query: 244 agagatgctggggcatttccagtcttacctcctatagtgcctccatcagccaatcaccta 303
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 278 agagatgctggggcatttccagtcttacctcctagagtgcctccatcagccaatcaccta 219
Query: 304 taacaaccctcatc 317
|||||||||||||
Sbjct: 218 gaacaaccctcatc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 718
Length adjustment: 9
Effective length of query: 308
Effective length of database: 709
Effective search space: 218372
Effective search space used: 218372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no234_i10.g1 MSMg01no234_i10.g1 CHROMAT_FILE:
MSMg01no234_i10.g1 PHD_FILE: MSMg01no234_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:51:32 2005
(126 letters)
>mm_chr13_60149245_60149770
Length = 526
Score = 226 bits (117), Expect = 3e-64
Identities = 123/125 (98%)
Strand = Plus / Plus
Query: 1 aagtttgtgtgtggtgacaaggttcggggaaatgtgctttctctggcctcactagctaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagtttgtgtgtggtgacaaggttcggggaaatgtgctttctctggcctcactagctaga 260
Query: 61 gaaccaagtgattaataacttaaggccatccagagaaggatttagcacctttattccaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 261 gaaccaagtgattaataacttaaggccatccagagaaggatttagcacctttatttcaga 320
Query: 121 caaag 125
|||||
Sbjct: 321 caaag 325
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 126
Length of database: 526
Length adjustment: 8
Effective length of query: 118
Effective length of database: 518
Effective search space: 61124
Effective search space used: 61124
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
