Query= MSMg01no236_l11.b1 MSMg01no236_l11.b1 CHROMAT_FILE:
MSMg01no236_l11.b1 PHD_FILE: MSMg01no236_l11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:21 2005
(439 letters)
>mm_chr13_73298285_73299119
Length = 835
Score = 774 bits (400), Expect = 0.0
Identities = 426/436 (97%), Gaps = 6/436 (1%)
Strand = Plus / Plus
Query: 5 ggaattcagagtcattg-ctagtaaattttgtgaacagtatcagtgtagtgtctgagctg 63
|||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattcagagtcactggc-agtaaattttgtgaacagtatcagtgtagtgtctgagctg 263
Query: 64 gtgtctcagcaattgtgccttgtccgtgcggtccaacctggggttcagatgctcctagaa 123
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 264 gtgtctcagcaattgtgccttgtccgtgcggtccaacctggggttcagacgctcctagaa 323
Query: 124 agatgacctggaacccacagtgctgatcaaatctgcattactacctcataaagaagggag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agatgacctggaacccacagtgctgatcaaatctgcattactacctcataaagaagggag 383
Query: 184 agatgggagggcccttagaacaaactgtttttttttttttttcctgttccaggatcgcag 243
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 384 agatgggagggcccttagaacaaactgttttttttttttt--cctgttccaggatcgcag 441
Query: 244 ccagtctatgtgatctatggggcttgtgtctgtgtatatttttctttacaaaaaaaaaaa 303
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 442 ccagtctatgtgatctatggggcttgtgtctgtgtagatttttctttacaaaaaaaaa-- 499
Query: 304 gatcattataactccaagtgtcctattaatggaaacagtatccagcaaaggtggcagaat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gatcattataactccaagtgtcctattaatggaaacagtatccagcaaaggtggcagaat 559
Query: 364 tcaacatgccagtcatctctggttgtgagcagaatcttcctctatccccagcaggtctac 423
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcaacatgccagtcatctctggctgtgagcagaatcttcctctatccccagcaggtctac 619
Query: 424 ctccccacctctatta 439
||||||||||||||||
Sbjct: 620 ctccccacctctatta 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 835
Length adjustment: 9
Effective length of query: 430
Effective length of database: 826
Effective search space: 355180
Effective search space used: 355180
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no236_l11.g1 MSMg01no236_l11.g1 CHROMAT_FILE:
MSMg01no236_l11.g1 PHD_FILE: MSMg01no236_l11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:21 2005
(115 letters)
>mm_chr13_73473562_73474076
Length = 515
Score = 197 bits (102), Expect = 1e-55
Identities = 111/114 (97%)
Strand = Plus / Minus
Query: 2 tcactctagatgtaggaggaaggagctcggcttcaggtcacacgtaacagaagagaaaag 61
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tcaccctagatgtaggaggaaggagctcggcttcaggtcacacgtaacagaagagaaaag 256
Query: 62 tgccaccaggaattaggccttggcatctctgtggaatgaatgcggattgtatag 115
|||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tgccaccaggaaccaggccttggcatctctgtggaatgaatgcggattgtatag 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 115
Length of database: 515
Length adjustment: 8
Effective length of query: 107
Effective length of database: 507
Effective search space: 54249
Effective search space used: 54249
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
