Query= MSMg01no237_a20.b1 MSMg01no237_a20.b1 CHROMAT_FILE:
MSMg01no237_a20.b1 PHD_FILE: MSMg01no237_a20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:46 2005
(314 letters)
>mm_chr13_33029771_33030484
Length = 714
Score = 534 bits (276), Expect = e-156
Identities = 302/312 (96%), Gaps = 4/312 (1%)
Strand = Plus / Plus
Query: 4 ggaattctaatgcttttgaaggctatcaatctatgtaaagtatatctgaactgttgccct 63
|||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 206 ggaattctgatgcttttgaaggctatcaatctatgtaaagtatatcagaactg---ccct 262
Query: 64 ttaactaaactctgccacttctaattgaaatatctcaaaa-caccccttgataattaaat 122
|||||||||||| || | |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 263 ttaactaaactcagctatttctaattgaaatatctcaaaaacaccccttgataattaaat 322
Query: 123 cagaaccatgagtttgctatctggcacttaattcatatacttgaaagagttgcgtatgta 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 323 cagaaccatgagtttgctatctggcacttaattcatatacttgaaagagttgcgtaggta 382
Query: 183 caaggtacagcatgaaattatttatgcaccactggtaaatgaattctatataaagttttg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 caaggtacagcatgaaattatttatgcaccactggtaaatgaattctatataaagttttg 442
Query: 243 agagttccaccctagttgttactcaggtaatctcattgcccttaaagaagtcttactgga 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 agagttccaccctagttgttactcaggtaatctcattgcccttaaagaagtcttactgga 502
Query: 303 ggagactctccc 314
||||||||||||
Sbjct: 503 ggagactctccc 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no237_a20.g1 MSMg01no237_a20.g1 CHROMAT_FILE:
MSMg01no237_a20.g1 PHD_FILE: MSMg01no237_a20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:46 2005
(203 letters)
>mm_chr13_33175426_33176027
Length = 602
Score = 308 bits (159), Expect = 2e-88
Identities = 198/213 (92%), Gaps = 13/213 (6%)
Strand = Plus / Minus
Query: 1 cactgaaagactgcaaaaaatgctagagatccttttttgtaaggtgtgtgcatgggggtg 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cactgaaagactgc-aaaaatgctagagatccttttttgtaaggtgtgtgcatgggggtg 267
Query: 61 tagaggcacctttgtggccccttgaataaggtcacagagctccagtttctagctacacct 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 266 tagaggcacctttgtggccccttgaataaggtcacagtgctccagtttctagctacacct 207
Query: 121 atgtatgagagagagtgagagagagagagagagagagagaga--ga-gag-ag-ag-ag- 173
||||||||||||||| |||||||||||||||||||||||||| || ||| || || ||
Sbjct: 206 atgtatgagagagagagagagagagagagagagagagagagaaggaagaggaggaggagg 147
Query: 174 -agag--agag-aagaaggaggaggaggaggag 202
|||| |||| |||| ||||||||||||||||
Sbjct: 146 aagaggaagaggaaga-ggaggaggaggaggag 115
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 203
Length of database: 602
Length adjustment: 8
Effective length of query: 195
Effective length of database: 594
Effective search space: 115830
Effective search space used: 115830
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
