TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTGTTCGATTTTCTG
AAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGCCCCCTATC
TGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTTTTG
TCTTGTTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGG
TCCCATTTGTCAATTCTCGATCTTACAGCACATGCCATTGCTGTTCTGTT
CAGGAATTTTTCCCCTGTGCCCATATCTTCGAGGCTTTTCCCCACTTTCT
CCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCTTTGATCCAC
TTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCATTCT
TCTACATGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGCTGT
CTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTAGAAGATCAAGTGACTA
TAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCTAC
TTGTCTGTTTCTATACCAGTACCATGCAGTTTTTATCACAATTGCTCTGT
AGTANAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGTTCTTTTATCC
TTGAGAAGACTTTTTGCTATCCTAGGTTTTTTGTTATTCCAGATGAATTT
GCNAATTT

ATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXACTGGGTCACCCTGCAGTACTTCCTG
GTAATATTCCCATTGCCCTGTGGGAAACAAGAGCCTTAGAGAGATAAGGC
AGCTTGCTCCAAGATCATGTACCTCCCAGTGAAGGATTGGAATGTGAGCT
GGGCCTGGGTGGCCAAGGGGAGGTGCATACAGTCTGGTAGGGCTCTGTCC
CCTCTTGCCACCATGCTCACTCTCTGCTTCATGCAATGGCAGGATCCAGC
CTGTGCTGCCCTGAGATTGCATTGTGGCCATAGTCTAACTCGGTGACTTG
CTCCAGAGCCTTCTGAGAGTTGGCATTGCAGGTAGGCTGCCATGCCCACT
GGGCATTTACCTGGATTCTGGAGATGTAAAGTCTGGCTCTCGCCTTACTT
AGCAAGTGCTTTTAGCAATCAAGCCCATACTTCCCCAGGTCCCTGCCCTG
TTCCACTGTTTCTTAGACAGAATCTCACGGTGTAGCCCTGGCCTGGCCTG
GCACTCACTGTCTAAACCCAGCCTGAGTCAACCTTGTGGTGACCCACTTC
CATCTGCTTCCTCAGTACCGGGATTACAGTCAGGCACCACCAGGCCTGGT
GTGGTGAGAGCTGTCCTGCAGGCAGACGGACCAGAGTACACCATANACTG
GAGAACAGAGAGGGAGCACGTGCATCTTTTTATCN

Query= MSMg01no260_d12.g1 MSMg01no260_d12.g1 CHROMAT_FILE:
MSMg01no260_d12.g1 PHD_FILE: MSMg01no260_d12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:15 2005
         (652 letters)



>mm_chr13_13624304_13625355
          Length = 1052

 Score = 1154 bits (597), Expect = 0.0
 Identities = 623/632 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   actgggtcaccctgcagtacttcctggtaatattcccattgccctgtgggaaacaagagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 actgggtcaccctgcagtacttcctggtaatattcccattgccctgtgggaaacaagagc 573

                                                                       
Query: 61  cttagagagataaggcagcttgctccaagatcatgtacctcccagtgaaggattggaatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 cttagagagataaggcagcttgctccaagatcatgtacctcccagtgaaggattggaatg 513

                                                                       
Query: 121 tgagctgggcctgggtggccaaggggaggtgcatacagtctggtagggctctgtcccctc 180
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 512 tgagctgggcctgggtggccaaggggaggtgcctacagtctggtagggctctgtcccctc 453

                                                                       
Query: 181 ttgccaccatgctcactctctgcttcatgcaatggcaggatccagcctgtgctgccctga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ttgccaccatgctcactctctgcttcatgcaatggcaggatccagcctgtgctgccctga 393

                                                                       
Query: 241 gattgcattgtggccatagtctaactcggtgacttgctccagagccttctgagagttggc 300
           ||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||
Sbjct: 392 gattgcattgtggccatagtctaactcagtggcttgctccagagtcttctgagagttggc 333

                                                                       
Query: 301 attgcaggtaggctgccatgcccactgggcatttacctggattctggagatgtaaagtct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 attgcaggtaggctgccatgcccactgggcatttacctggattctggagatgtaaagtct 273

                                                                       
Query: 361 ggctctcgccttacttagcaagtgcttttagcaatcaagcccatacttccccaggtccct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ggctctcgccttacttagcaagtgcttttagcaatcaagcccatacttccccaggtccct 213

                                                                       
Query: 421 gccctgttccactgtttcttagacagaatctcacggtgtagccctggcctggcctggcac 480
           |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 212 gccccgttccactgtttcttagacggaatctcacggtgtagccctggcctggcctggcac 153

                                                                       
Query: 481 tcactgtctaaacccagcctgagtcaaccttgtggtgacccacttccatctgcttcctca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 tcactgtctaaacccagcctgagtcaaccttgtggtgacccacttccatctgcttcctca 93

                                                                       
Query: 541 gtaccgggattacagtcaggcaccaccaggcctggtgtggtgagagctgtcctgcaggca 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  gtaccgggattacagtcaggcaccaccaggcctggtgtggtgagagctgtcctgcaggca 33

                                           
Query: 601 gacggaccagagtacaccatanactggagaac 632
           ||| ||||||||| ||||||| ||||||||||
Sbjct: 32  gacagaccagagtgcaccataaactggagaac 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space:   668964
Effective search space used:   668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)