Query= MSMg01no260_g20.b1 MSMg01no260_g20.b1 CHROMAT_FILE:
MSMg01no260_g20.b1 PHD_FILE: MSMg01no260_g20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:31 2005
(534 letters)
>mm_chr13_96052754_96053691
Length = 938
Score = 630 bits (326), Expect = 0.0
Identities = 361/374 (96%), Gaps = 4/374 (1%)
Strand = Plus / Minus
Query: 4 ggaattctccaagaggtcacgaacttcctgttgcagccagcacaggcattga-tgactga 62
|||||||||||||||| || |||||||||||||||||||||||||||||||| || ||||
Sbjct: 382 ggaattctccaagaggccatgaacttcctgttgcagccagcacaggcattgattgcctga 323
Query: 63 ctgttcctctctcagtgacactgtcaaaaaagactcctgggagagcagaccaggtgtcca 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ctgttcctctctcagtgacactgtcaaaaaagactcctgggagagcagaccaggtgtcca 263
Query: 123 ataaagatagtagcctgtagttatgaagccatagaca---tctcatctaagtgtgcagtg 179
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 262 ataaagatagtagcctgtagttatgaagccatagacatcttctcatctaagtgtgcagtg 203
Query: 180 tgctttagcatgccctttttaagcacgagggagtaagacaaagacaggttagataagtag 239
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 202 tgctttagcatgccctttttaagcatgagggagtaagacaaagacaggttagataagtag 143
Query: 240 ccagcgtcacacagcatgcagggctagggcaggcttattctgtatggttcctagatacct 299
|||| |||||||||||||||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 142 ccagtgtcacacagcatgcaggggtagggcaggcttattctgtagggctcctagatacct 83
Query: 300 tacccttagtcactgccctcactgagcctgaggcagaagtggtatacagatgtggggaag 359
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 tacccttagttactgccctcactgagcctgaggcagaagtggtatacagatgtggggaag 23
Query: 360 gcttatttttttaa 373
||||||||||||||
Sbjct: 22 gcttatttttttaa 9
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 938
Length adjustment: 10
Effective length of query: 524
Effective length of database: 928
Effective search space: 486272
Effective search space used: 486272
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no260_g20.g1 MSMg01no260_g20.g1 CHROMAT_FILE:
MSMg01no260_g20.g1 PHD_FILE: MSMg01no260_g20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:31 2005
(528 letters)
>mm_chr13_95901374_95902301
Length = 928
Score = 959 bits (496), Expect = 0.0
Identities = 520/528 (98%)
Strand = Plus / Plus
Query: 1 tcctgggaaggaccccagggatgaaaacccagtacacagcctctctttcagctaacacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctgggaaggaccccagggatgaaaacccagtacacagcctctctttcagctaacacat 260
Query: 61 atggaagacaacctcccatcatgccttaatcacgtgaaaccaggagacaattcccattat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atggaagacaacctcccatcatgccttaatcacgtgaaaccaggagacaattcccattat 320
Query: 121 cccattgcttccttatagtattttaaagatgtagggaggaggatgtgggaacgccatcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 cccattgcttccttatagtattttaaagatgtagggaggaggatgtgggaatgccatcaa 380
Query: 181 cagagcagactagttacagatgacgctggtgctgaggaagggctgtgatgacagtaccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagagcagactagttacagatgacgctggtgctgaggaagggctgtgatgacagtaccaa 440
Query: 241 ccccatcttccagaatcccaaggagctggaaacagggtgcagatgaatgcactcattgat 300
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 441 ccccatcttccagaatcccaaggagctggaaacagggtacagatgaatgcactcgttgat 500
Query: 301 ggagaacaaacaaactcagaatgctcccaaagtacagcggaggcccgagtgagtcccaaa 360
||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 501 ggagaacaaacaaactcagaacgctcccaaagtacagcggaggggtgagtgagtcccaaa 560
Query: 361 agaccactttatgtttgaccaaagtacattactcttttaaattggttccagtttgcagcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaccactttatgtttgaccaaagtacattactcttttaaattggttccagtttgcagcc 620
Query: 421 agtcgtgcttggatccattgagatctcttggtaggaaaacaggctggctatatgcctttg 480
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 621 agtcgtgcttggatccattgagatctcttggcaggaaaacaggctggctatatgcctttg 680
Query: 481 tctgggccagtggggagggcctggctctcttttgtttctgctctgagg 528
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tctgggccagtggggagggcctggctctcttttgtttctgctctgagg 728
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space: 475524
Effective search space used: 475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
