XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTTGACATAATCCCACCCAGGCCATGCTGAGAGCATCTCTTCCCTTCCCC
TTAGTGTGCAACTATACTCCTGTGAAAGATGTCTATTTCTGTTTATATAG
ATACAGACCAGTGCTTGTTGGCATGTTCCATTAAAACTTAGCTTCCACTC
TGACAAAGAAACTGTGACAGCACATAATCAAATAGCTGTTTGAGGCATCT
TCTCTCTAAAAATGTCATTAAAATGCATAAATTTCCTTAAGGAAATTATA
TTATTTTAAAGGTGGTTTGGTCAAGTGATAAACAGAGAGGTCAGGGAAGG
CTTAAGAATCCAAAGGAACATGGAGATTTATGTCCCTTGTGGGTGTTATA
AGGAGGAAATTAATGAACACAGACAACTTAGATAGACTCTGACCATGTCT
GTACAACAAACGAAAATGATAATACTGGTTCCCAGAGGCAAAGATCAGAA
ATCCCACACCCCTTTTCATCTTTTTTTTTATTTTGCTAACATTAGTCTTA
TGACATGGACTATAGTATTACCATCCAATGAGAGATATCTAGAAAGGCAA
GCCTTGAATATTATGTGAATGTGCCAGGATACCATGATATGTTCGTTCTC
TGGGTGCACTAGGTAGAAGTCCCATGAACAGTGGAAAGATGATAGAGTGA
TGCTTGTTGNTAACCCCATATGTTAGGGN

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCAATCAAGTAGAACCC
AAAAGAATGATACAAAGAATCAACCAAACCAGCAGCTGCTTCTTTGAGAA
AATCAACTAGTTCGATAAACTCTTAGCCAGATTAACCAGAGGGCAGAAAG
ACAGTATCCAAATCAACAAAATAAGAAATGAAAAGGGAGACATAACAAAA
GAAACTGAGAAAATTTTAAAAATCAGATCCTATTACAAAAAGCTATGCTC
AACAAAACTGGATGATCTGGAGGAAATGGACAACTTTCTGGACACATACC
AGAAACCAAAATTAATTCAGGATCAGATAAACAATCTAAATAGTCCCATA
ACCCCTAAAATAATAGAAGCAGTTGTTAATAGTCTCCCCCCCCCAAAAAA
AAAGCCCTGGGTAAGAAAGATTTAGTGCATAATTCTATAAGACCTCCAAA
GAAGACCTAATGCGGATACTCCTCAAACTATTCCACAAAATAGAAACAGA
AGGAACACTAACCATTTCTTTCTATAAGGCCACAATTACTCTGATACCTA
AACCACACAAAACCCTACAAAAGAAAAGAACTTCAGACCAGTTTCCTTTA
TGGCTATCAATGCAAAAATTCTCAATAAAATTCTCACAAACTGAATCCAA
GAACACATCAGAATGATCATC

Query= MSMg01no261_p02.b1 MSMg01no261_p02.b1 CHROMAT_FILE:
MSMg01no261_p02.b1 PHD_FILE: MSMg01no261_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:27 2005
         (528 letters)



>mm_chr13_82559517_82560444
          Length = 928

 Score =  876 bits (453), Expect = 0.0
 Identities = 507/525 (96%), Gaps = 4/525 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcttgacataatcccacccaggccatgctgagagcatctcttcccttccccttag 63
           ||||||||||| ||||||| | |||||||| |||||||||||||||||||||||||||||
Sbjct: 726 ggaattcttgatataatcctagccaggccaggctgagagcatctcttcccttccccttag 667

                                                                       
Query: 64  tgtgcaactatactcctgtgaaagatgtctatttctgtttatatagatacagaccagtgc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 tgtgcaactatactcctgtgaaagatgtctatttctgtttatatagatacagaccagtgc 607

                                                                       
Query: 124 ttgttggcatgttccattaaaacttagcttccactctgacaaagaaactgtgacagcaca 183
           ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 606 ttgttggcatgctccattaaaacttagcttccactctgacaaagaaaatgtgacagcacc 547

                                                                       
Query: 184 taatcaaatagctgtttgaggcatcttctctct-aaaaatgtcattaaaatgcataaatt 242
           ||||||||||||||||||||| ||||||||||| ||||| ||||| |||||||||| |||
Sbjct: 546 taatcaaatagctgtttgaggtatcttctctctgaaaaa-gtcataaaaatgcatacatt 488

                                                                       
Query: 243 tccttaaggaaattatattattttaaaggtggtttggtcaagtgataaacagagaggtca 302
           |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tccttaaggaaattatcttatgttaaaggtggtttggtcaagtgataaacagagaggtca 428

                                                                       
Query: 303 gggaaggcttaagaatccaaaggaacatggagatttatgtcccttgtgggtgttataagg 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gggaaggcttaagaatccaaaggaacatggagatttatgtcccttgtgggtgttataagg 368

                                                                       
Query: 363 aggaaattaatgaacacagacaacttagatagactctgaccatgtctgtacaacaaacga 422
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 367 aggaaattaatgaacacagacaacttaggtagactctgaccatgtctgtacaacaaacga 308

                                                                       
Query: 423 aaatgataatactggttcccagaggcaaagatcagaaatcccacaccccttttcatcttt 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 aaatgataatactggttcccagaggcaaagatcagaaatcccacaccccttttcatcttt 248

                                                        
Query: 483 tttttt-attttgctaacattagtcttatgacatggactatagta 526
           |||||| |||| ||||||||||||||||||||||| |||||||||
Sbjct: 247 tttttttattt-gctaacattagtcttatgacatgaactatagta 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space:   475524
Effective search space used:   475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)