Query= MSMg01no263_b02.b1 MSMg01no263_b02.b1 CHROMAT_FILE:
MSMg01no263_b02.b1 PHD_FILE: MSMg01no263_b02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:53 2005
(323 letters)
>mm_chr2_139938697_139939420
Length = 724
Score = 576 bits (298), Expect = e-169
Identities = 312/320 (97%), Gaps = 7/320 (2%)
Strand = Plus / Minus
Query: 6 gaattcttggtctttt----cccatcttcctgcttcagccctcctgaatatctatgacca 61
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gaattcttggtc---tcaaacccatcttcctgcttcagccctcctgaatatctatgacca 466
Query: 62 cgggcatgtgtgactgcctggctaaagatgggcttattccaacagcagctcattaatcaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 cgggcatgtgtgactgcctggctaaagatgggcttattccaacagcagctcattaatcaa 406
Query: 122 ggataaactctgaaaataattattgattccattaagttcctccatttgaatggataacct 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ggataaactctgaaaataattattgattccattaagttcctccatttgaatggataacct 346
Query: 182 agcctttacgatctacaacaattgtaggggtctactggaaaactcaaaaaggatcagaaa 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 agcctttacgatctacaacaattgtaggggtctactggaaaactcaaaaaggatcagaaa 286
Query: 242 ccacacaggaaatacacacaggaaatgttctttgtatgccaatgagcctatccattgcct 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ccacacaggaaatacacacaggaaatgttctttgtatgccaatgagcctatccattgcct 226
Query: 302 caggaatgtatcacattaaa 321
||| ||||||||||||||||
Sbjct: 225 cagaaatgtatcacattaaa 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 724
Length adjustment: 9
Effective length of query: 314
Effective length of database: 715
Effective search space: 224510
Effective search space used: 224510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no263_b02.g1 MSMg01no263_b02.g1 CHROMAT_FILE:
MSMg01no263_b02.g1 PHD_FILE: MSMg01no263_b02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:53 2005
(572 letters)
>mm_chr13_31343242_31344213
Length = 972
Score = 1036 bits (536), Expect = 0.0
Identities = 563/572 (98%)
Strand = Plus / Minus
Query: 1 catccagacagataaaagccacctcaaatctagtctgggacagaactttttgcgcaatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 catccagacagataaaagccacctcaaatctagtctgggacagaactttttgcgcaatgt 713
Query: 61 gattcataccttccccgaggaagttccaatccctggccagtgtttaagcagttagctgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 gattcataccttccccgaggaagttccaatccctggccagtgtttaagcagttagctgac 653
Query: 121 gaagctcaatggaatgaaaatctctgctgaaacaggaacttcttatctctccctctgtca 180
|||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 652 gaagttcaatggaatgaaaatctctgctggaacaggaacttcttatctctacctctgtca 593
Query: 181 ggaaccttaacgctaaggacgtctcgccaaatatcctttccttacagtcacagagagttc 240
||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||
Sbjct: 592 tgaaccttaacgctaaggacgtctcgacaaataacctttccttacagtcacagacagttc 533
Query: 241 tgtataactcttgcttgtctcgaaagtgttcctactgttaaattgaattaagtttggcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tgtataactcttgcttgtctcgaaagtgttcctactgttaaattgaattaagtttggcct 473
Query: 301 acatttctttccatactttgatgacaatacttggtccaaagtggcttctgtacttagtga 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 aaatttctttccatactttgatgacaatacttggtccaaagtggcttctgtacttagtga 413
Query: 361 actggactctagcttgatgtataaatactctgaagcctaatccaaaaccttgtatctagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 actggactctagcttgatgtataaatactctgaagcctaatccaaaaccttgtatctagc 353
Query: 421 acagagtcccagccagtcataccaaccaaacccaaagccgaccctactcttaaagctcct 480
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 acagaatcccagccagtcataccaaccaaacccaaagccgaccctactcttaaagctcct 293
Query: 481 agatgaagtccaattatggaatgtgcggggctacactaccaggagatcgcagtgtcactg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 agatgaagtccaattatggaatgtgcggggctacactaccaggagatcgcagtgtcactg 233
Query: 541 tctcttttccagctagagaaaaatatctcagc 572
||||||||||||||||||||||||||||||||
Sbjct: 232 tctcttttccagctagagaaaaatatctcagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space: 540644
Effective search space used: 540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
