Query= MSMg01no263_b22.b1 MSMg01no263_b22.b1 CHROMAT_FILE:
MSMg01no263_b22.b1 PHD_FILE: MSMg01no263_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:56 2005
(316 letters)
>mm_chr13_79913646_79914361
Length = 716
Score = 503 bits (260), Expect = e-147
Identities = 299/312 (95%)
Strand = Plus / Plus
Query: 5 gaattccctctaggtctaacaaacacctgaacctcattttcatgcaaataaggcattctt 64
||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||
Sbjct: 205 gaattccctctaggtctaacaaacacctgaacctccttttcatgcaaatgaggcattttt 264
Query: 65 gtctgtctccttagccccagacaacaatctaccctcacagtgaaagcctctgcccaaagg 124
||||||||||| |||||||||||||||||||| |||||| |||||||||||||||| ||
Sbjct: 265 gtctgtctcctgagccccagacaacaatctacgttcacagagaaagcctctgcccaacgg 324
Query: 125 tttaaataacctttgatccctccaattaaactagctcctcaatgaagtctgtcttcagaa 184
||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 325 tttaaattaccgttgatccctccaattaaactagctgctcaatgaagtctgtcttcagaa 384
Query: 185 taatgtgctcattggccacttgaaggtttatcacactgcctattcctgtctcaatttact 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taatgtgctcattggccacttgaaggtttatcacactgcctattcctgtctcaatttact 444
Query: 245 tctcaggccaactgattcatggacaacttgatcagttgtctgatgaaggacaactatcct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 445 tctcaggccaactgattcatggacaacttgatcagttgtctgatgaaggacaactgtccc 504
Query: 305 attaagggacag 316
||||||||||||
Sbjct: 505 attaagggacag 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no263_b22.g1 MSMg01no263_b22.g1 CHROMAT_FILE:
MSMg01no263_b22.g1 PHD_FILE: MSMg01no263_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:57 2005
(291 letters)
>mm_chr13_80100603_80101291
Length = 689
Score = 509 bits (263), Expect = e-148
Identities = 286/299 (95%), Gaps = 11/299 (3%)
Strand = Plus / Minus
Query: 1 atttcatttgaatagtcagagagatctatagacaaagagtggaaattgaggcaatggctg 60
||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 331 atttcattt--atagtcagagagatctatagacaaaaagtggaaattgaggcaatggctg 274
Query: 61 agagatgaatgaaattttgattagtggggagaaaaggagtgtgcatcttaagtgactata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 agagatgaatgaaattttgattagtggggagaaaaggagtgtgcatcttaagtgactata 214
Query: 121 ttggcacag--------gtagtgtttgaaagtgcaccaattgacaaatctacactttttc 172
||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 ttggcacaggtagagatgtagtgtttgaaagtgcaccaattgacaaatctacactttttc 154
Query: 173 ttctaagtttaggtaattctgctgaaaacacatgcatatggaataaattagaaatgaaaa 232
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 153 ttctaagtttaggtaattctactgaaaacacatgcatatggaataaattagaaatg-aaa 95
Query: 233 aaattaacaaaaaaattttccactctgaaatttattgtaatgttatcttcaagttgtcc 291
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 aaattaacaaaaaaattttccactctgaaatttattgtaatgttatcttcaagttgtcc 36
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 689
Length adjustment: 9
Effective length of query: 282
Effective length of database: 680
Effective search space: 191760
Effective search space used: 191760
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
