NCCCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCACGCAGTTGACTCCTTCTCAACAGTCTGTGTTACGGGAACA
CTTCATTACCACCATTCCCCAGCTGACGAGTTCTGAATTCACGCAGTTGA
ATCCTTCTCAACAGTCTGTTTTACGGGAACACTTCATTACCACCGTTCCC
CAGCTGAAGAGTTCTGAATTCAGGCTGGATCCTTCTCAACAGTCTGTTTT
ACGGGAACCTTTATGACCGTGACCCGCAGTTCTGGTTCCAGAATGAGGGA
TCTTCCTTGCGCCGGTGATGGTAACCGTCCCAGGTTTTCTCGTCCCAGGT
CCTCTTGTCCCAGGTCTTCTCGTTCCGGGTTTCAGCACCAACTCTTACAC
GCGTTCTCGCGACCGGCCACCAAGAACACAGCAAACCAGAATCTTCTGCG
GCAAAACTTTATTGCTTACATCTTCAGGAGCAAGAGTGCAAGAGAGCAAG
AGTGCAAGAGAGAGAACAAGAACAAGAAAGCAAGAGAGAAAAAGCAAGAA
CAAGAGAGAGAGAAAGAATGGCAAAACCCCGTCCCTTTTAAGGAGAATTA
TCCTCCGCCTAGGACGTATTACTCCCTGATTGGCTGCAGCCCATCGGCCC
AGTTGTCATCACGAGAAAGGCAGAACACATGGCGGGAAAACTGCCCCTGC
ACGTGTGCAGATTATGTTTACCACTTAGAACACAG

NNCCCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAAGGTGCACT
CTATGCTGTCTGTCCAGTGAAGACATCAATCCATTTCTCAGAATTCAGCT
CACCAAGGTGCACTCTATGCTGTCTGTCCAGTGAAGACATCAGTCCATTT
CTCAGAATGTATTCCCACAGCAAGTGACACACAATTGTAAATACACACTT
ACATGAAAATCTAACAACCTGTCCAAGGTCTTTATAAGCAAAACTAGAAA
AGTCTAATGAGGGAAATCATAAAATACCTAAATAATGAAGATATGTTTTA
TATTCATGAGCAGAAATAATTGATATTGTTAAAACATCATTTCTTTGTAA
ATTATTCTATAATGAAACAAACTATATCGAAATCCCAGCAAGTTGCTTTC
TGGACATTAGTAAGCTAGTCCTAATGTTCATATTCAAAGGCTGCCAATAC
AATGCTGAAAGAAAATTAACAAAGTCAGAAGACTGATTCTTCCTAATTGT
AGAACTTAAAACATATCTGTATGTGTATACCCAAAAGATAAATAAATCAA
CATAACACAACTAATAGCCCAGAAACAGACTATTTAAATATAATTGACTG
ACCTTTGGAAAAGGAGTAAAGGCAATGTAATACGATGAATAACAAAGCCC
ATATAATGATCTTAATGCTATGTCTGTCTGTCTGTCT

Query= MSMg01no263_k04.g1 MSMg01no263_k04.g1 CHROMAT_FILE:
MSMg01no263_k04.g1 PHD_FILE: MSMg01no263_k04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:36 2005
         (645 letters)



>mm_chr13_115151470_115152515
          Length = 1046

 Score = 1180 bits (610), Expect = 0.0
 Identities = 637/646 (98%), Gaps = 1/646 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   caaggtgcactctatgctgtctgtccagtgaagacatcaatccatttctcagaattcagc 60
           |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 caaggtgcgctctatgctgtctgtccagtgaagacatcagtccatttctcagaattcagc 260

                                                                       
Query: 61  tcaccaaggtgcactctatgctgtctgtccagtgaagacatcagtccatttctcagaatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaccaaggtgcactctatgctgtctgtccagtgaagacatcagtccatttctcagaatg 320

                                                                       
Query: 121 tattcccacag-caagtgacacacaattgtaaatacacacttacatgaaaatctaacaac 179
           |||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 tattcccacagttaagtgacacacaattgtaaataaacacttacatgaaaatctaacaac 380

                                                                       
Query: 180 ctgtccaaggtctttataagcaaaactagaaaagtctaatgagggaaatcataaaatacc 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtccaaggtctttataagcaaaactagaaaagtctaatgagggaaatcataaaatacc 440

                                                                       
Query: 240 taaataatgaagatatgttttatattcatgagcagaaataattgatattgttaaaacatc 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaataatgaagatatgttttatattcatgagcagaaataattgatattgttaaaacatc 500

                                                                       
Query: 300 atttctttgtaaattattctataatgaaacaaactatatcgaaatcccagcaagttgctt 359
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atttttttgtaaattattctataatgaaacaaactatatcgaaatcccagcaagttgctt 560

                                                                       
Query: 360 tctggacattagtaagctagtcctaatgttcatattcaaaggctgccaatacaatgctga 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctggacattagtaagctagtcctaatgttcatattcaaaggctgccaatacaatgctga 620

                                                                       
Query: 420 aagaaaattaacaaagtcagaagactgattcttcctaattgtagaacttaaaacatatct 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagaaaattaacaaagtcagaagactgattcttcctaattgtagaacttaaaacatatct 680

                                                                       
Query: 480 gtatgtgtatacccaaaagataaataaatcaacataacacaactaatagcccagaaacag 539
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtatgtggatacccaaaagataaataaatcaacataacacaactaatagcccagaaacag 740

                                                                       
Query: 540 actatttaaatataattgactgacctttggaaaaggagtaaaggcaatgtaatacgatga 599
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 actatttaaatatagttgactgacctttggaaaaggagtaaaggcaatgtaatacgatga 800

                                                         
Query: 600 ataacaaagcccatataatgatcttaatgctatgtctgtctgtctg 645
           | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aaaacaaagcccatataatgatcttaatgctatgtctgtctgtctg 846


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1046
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1036
Effective search space:   657860
Effective search space used:   657860
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)