Query= MSMg01no264_j01.b1 MSMg01no264_j01.b1 CHROMAT_FILE:
MSMg01no264_j01.b1 PHD_FILE: MSMg01no264_j01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:47 2005
(641 letters)
>mm_chr13_96564180_96565220
Length = 1041
Score = 1232 bits (637), Expect = 0.0
Identities = 637/637 (100%)
Strand = Plus / Minus
Query: 5 gaattccactaagagtttgactgctatcaggttaaatccacgggtcaattggaagggaac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 gaattccactaagagtttgactgctatcaggttaaatccacgggtcaattggaagggaac 748
Query: 65 tgatgtcttaactgctgaatctcacagttcataaactggtggctctgtcgttgacctcag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 tgatgtcttaactgctgaatctcacagttcataaactggtggctctgtcgttgacctcag 688
Query: 125 ctgtctgggaacgagcattttttatttcctaacaaaaatgtttgtgaagaactaatatga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ctgtctgggaacgagcattttttatttcctaacaaaaatgtttgtgaagaactaatatga 628
Query: 185 ggtcttcttttcttctcacctttcactgtgtcagcgttactaagaaagtcacacatttcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ggtcttcttttcttctcacctttcactgtgtcagcgttactaagaaagtcacacatttcc 568
Query: 245 tgtctgggaccttagtgaccatgtaatagcacttccattgatcaaggccagctccccata 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tgtctgggaccttagtgaccatgtaatagcacttccattgatcaaggccagctccccata 508
Query: 305 aaacacaattcacatcactgtttctgatcttcctcctccttatttacagctacggagtct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 aaacacaattcacatcactgtttctgatcttcctcctccttatttacagctacggagtct 448
Query: 365 gtgtttggtgaaaggcaggcaaaatctaatttgtaacggctagaactcgttgtccactta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gtgtttggtgaaaggcaggcaaaatctaatttgtaacggctagaactcgttgtccactta 388
Query: 425 aacaatagagaactgagtcacaaattctgtcttcataaaactcctccatactttggaaaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aacaatagagaactgagtcacaaattctgtcttcataaaactcctccatactttggaaaa 328
Query: 485 tgactcatttttaggcagcgtctgctgtcactgcttgccaggaagtgatctaacttggat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tgactcatttttaggcagcgtctgctgtcactgcttgccaggaagtgatctaacttggat 268
Query: 545 aagtttgaaggtttgtagaagttgtgcagcccctgtagagaggcattctgagctggcatc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aagtttgaaggtttgtagaagttgtgcagcccctgtagagaggcattctgagctggcatc 208
Query: 605 cattgtgtgctcgtgtgtatgtgtgtgtgtgtgtgcg 641
|||||||||||||||||||||||||||||||||||||
Sbjct: 207 cattgtgtgctcgtgtgtatgtgtgtgtgtgtgtgcg 171
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space: 650561
Effective search space used: 650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no264_j01.g1 MSMg01no264_j01.g1 CHROMAT_FILE:
MSMg01no264_j01.g1 PHD_FILE: MSMg01no264_j01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:47 2005
(172 letters)
>mm_chr13_96409329_96409899
Length = 571
Score = 325 bits (168), Expect = 9e-94
Identities = 171/172 (99%), Gaps = 1/172 (0%)
Strand = Plus / Plus
Query: 1 attgtcaaaattctaccttcacggtctatatctaagccggcacctgcttcacagtgcagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 attgtcaaaattctaccttcacggtctatatctaagccggcacctgcttca-agtgcagg 259
Query: 61 gatctcaacttcccctccctactatgtgctcaagggcacagggcattgtggacaggcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gatctcaacttcccctccctactatgtgctcaagggcacagggcattgtggacaggcaga 319
Query: 121 tcgggcagatcgaaggctacctggagctccccgcaccccaccccctcacagt 172
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tcgggcagatcgaaggctacctggagctccccgcaccccaccccctcacagt 371
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 172
Length of database: 571
Length adjustment: 8
Effective length of query: 164
Effective length of database: 563
Effective search space: 92332
Effective search space used: 92332
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
