Query= MSMg01no264_k16.b1 MSMg01no264_k16.b1 CHROMAT_FILE:
MSMg01no264_k16.b1 PHD_FILE: MSMg01no264_k16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:55 2005
(168 letters)
>mm_chr13_74259595_74260162
Length = 568
Score = 290 bits (150), Expect = 3e-83
Identities = 163/168 (97%)
Strand = Plus / Plus
Query: 1 tatggaatagaagaagnagaagaggncttccttccttccaagatccaggagggagcacgc 60
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 tatggaatagaagaagcagaagaggccttccttccttccaagatccaggagggagcacgc 260
Query: 61 ctctttagcaggacaggggagggaaagctgtgaagggaataaggttaacagagctcagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctttagcaggacaggggagggaaagctgtgaagggaataaggttaacagagctcagac 320
Query: 121 tctttgtgcctggttagggaaggctttttttttttttttttttttttt 168
|| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcacagtgcctggttagggaaggctttttttttttttttttttttttt 368
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 168
Length of database: 568
Length adjustment: 8
Effective length of query: 160
Effective length of database: 560
Effective search space: 89600
Effective search space used: 89600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no264_k16.g1 MSMg01no264_k16.g1 CHROMAT_FILE:
MSMg01no264_k16.g1 PHD_FILE: MSMg01no264_k16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:55 2005
(290 letters)
>mm_chr13_74422253_74422942
Length = 690
Score = 491 bits (254), Expect = e-143
Identities = 280/290 (96%), Gaps = 3/290 (1%)
Strand = Plus / Minus
Query: 1 tttgaagaaatttcattgaggtctggtgcattttgtattgctggattctgtgtggtaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 tttgaagaaatttcattgaggtctggtgcattttgtattgctggattctgtgtggtaata 584
Query: 61 tttaattgaggatttctatgtctatgttcataagatcttcttattctgtagtgtctttgc 120
||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||
Sbjct: 583 tttaattgaggatttctgtgtctatgttcataagatcttc---ttctgtaatgtctttgc 527
Query: 121 tttggtagcaaaacaaggctgaactcacatatgagtattgtttagtttttctcacataag 180
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 526 tttggtagcaaaacaaggctgaactcacatatgaatattgtttagtttttctcatataag 467
Query: 181 caatggaattagtctcatattttagattagtggactatatcagggaagctatttggactt 240
||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||
Sbjct: 466 caatggaattagtctcatattttagattaatggactacatcagagaagctatttggactt 407
Query: 241 gagttttctttgttaagatatagaactatttatgttatttatttttcttg 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gagttttctttgttaagatatagaactatttatgttatttatttttcttg 357
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
