Query= MSMg01no265_n24.b1 MSMg01no265_n24.b1 CHROMAT_FILE:
MSMg01no265_n24.b1 PHD_FILE: MSMg01no265_n24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:30 2005
(317 letters)
>mm_chr13_30985907_30986623
Length = 717
Score = 557 bits (288), Expect = e-163
Identities = 306/312 (98%)
Strand = Plus / Minus
Query: 4 ggaattcctatgaaataggtccaaaatgagagtatgtcttaaggtttcctggcaggaaaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ggaattcctatgaaataggtccaaaatgagagtatgtcttaaggtttcctggcaggaaaa 456
Query: 64 gcctttggtcaaccccctgctgggactctcaaacaggactttgaaaggtggccttcaaag 123
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gcctttggttaaccccctgctgggactctcaaacaggactttgaaaggtggccttcaaag 396
Query: 124 gtgtcgtcttctttgttcctaaaatggcttgagtttaactctcagagcagctggctgtct 183
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 395 gtgtcgtcttctttgttcctaaaatggcttgagtttaactccctgagcagctggctgtct 336
Query: 184 ggtaaactgggggaaaggccatcagttcagtctcgcatctttggatctgtgctctagtta 243
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 335 ggtaaactgggggaaaggccgtcagctcagtctcgcatctttggatctgtgctctagtta 276
Query: 244 gggcttccacaagaacttcctagaatcagagctcagtgaggggcatttagaagaggagcc 303
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gggcttccacaaggacttcctagaatcagagctcagtgaggggcatttagaagaggagcc 216
Query: 304 aaacttatgtaa 315
||||||||||||
Sbjct: 215 aaacttatgtaa 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no265_n24.g1 MSMg01no265_n24.g1 CHROMAT_FILE:
MSMg01no265_n24.g1 PHD_FILE: MSMg01no265_n24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:30 2005
(372 letters)
>mm_chr13_30898472_30899246
Length = 775
Score = 437 bits (226), Expect = e-127
Identities = 271/288 (94%), Gaps = 5/288 (1%)
Strand = Plus / Plus
Query: 1 tccagctgttgagccatctctccagcttcttaggtagcatttaccatgttttacttatgg 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 tccagctgttgagccatctctccagcttcttaggtagcatttaccatgctttacttatgg 260
Query: 61 gtgaagaat---ttgtttgaaattgtcaagttctgtcctcacaccaccaccaccaggtga 117
||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 gtgaagaatttcttgtttgaaattgtcaagctctgtcctcacaccaccaccaccaggtga 320
Query: 118 tggatcttggaagtatcttctattgtgtagcatctctctggcctctccctctttcatact 177
||||||||||||||||||||| |||||||||||| ||| ||| ||||||||||||||||
Sbjct: 321 cggatcttggaagtatcttctactgtgtagcatctatctagccgctccctctttcatact 380
Query: 178 ctaaattatccctgtggtttttccttccttccttccttccttccttccttccttccttcc 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctaaattatccctgtggtttttccttccttccttccttccttccttccttccttccttcc 440
Query: 238 ttccttccttccttcctccctccctccctcccttctttctctttcctt 285
||||||||||||||||| ||| ||| ||| ||||| |||| ||||||
Sbjct: 441 ttccttccttccttccttccttccttccttccttccttct--ttcctt 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 80
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 775
Length adjustment: 9
Effective length of query: 363
Effective length of database: 766
Effective search space: 278058
Effective search space used: 278058
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
