Query= MSMg01no266_l06.b1 MSMg01no266_l06.b1 CHROMAT_FILE:
MSMg01no266_l06.b1 PHD_FILE: MSMg01no266_l06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:33 2005
(319 letters)
>mm_chr13_55348887_55349606
Length = 720
Score = 600 bits (310), Expect = e-176
Identities = 313/314 (99%), Gaps = 1/314 (0%)
Strand = Plus / Minus
Query: 4 ggaattcctgtctccttttctac-tcacccatgccaacactggacttctcacaaacattc 62
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 517 ggaattcctgtctccttttctacatcacccatgccaacactggacttctcacaaacattc 458
Query: 63 agccgaggcgcaaccgattcagagtggctgccatgattgggatctgctgctgagtcctca 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 agccgaggcgcaaccgattcagagtggctgccatgattgggatctgctgctgagtcctca 398
Query: 123 ggtttacttgtaggaggagctctttgttctaagtagtcttcccgggccttctgcacagcg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ggtttacttgtaggaggagctctttgttctaagtagtcttcccgggccttctgcacagcg 338
Query: 183 tcagcaggaagtaagactccaaaagcaccctccgagttttctttctccctaaatctgtta 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tcagcaggaagtaagactccaaaagcaccctccgagttttctttctccctaaatctgtta 278
Query: 243 gcacgctttccgggcttagggcgcctttggtttaatcgctgccaccgctttttaggcacc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gcacgctttccgggcttagggcgcctttggtttaatcgctgccaccgctttttaggcacc 218
Query: 303 acctgattaacacc 316
||||||||||||||
Sbjct: 217 acctgattaacacc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 720
Length adjustment: 9
Effective length of query: 310
Effective length of database: 711
Effective search space: 220410
Effective search space used: 220410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no266_l06.g1 MSMg01no266_l06.g1 CHROMAT_FILE:
MSMg01no266_l06.g1 PHD_FILE: MSMg01no266_l06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:33 2005
(290 letters)
>mm_chr13_55186750_55187439
Length = 690
Score = 306 bits (158), Expect = 1e-87
Identities = 161/162 (99%)
Strand = Plus / Plus
Query: 1 aattaaaaaatgaaaacttacgtgcaacttttcttttagccaaacactttgatctgttcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattaaaaaatgaaaacttacgtgcaacttttcttttagccaaacactttgatctgttcg 260
Query: 61 actgttttgtcttcgttttctgcaatccattctcctcttttgtttcctgttataaataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actgttttgtcttcgttttctgcaatccattctcctcttttgtttcctgttataaataaa 320
Query: 121 aaaataagatcagagtaggtgacattaaaattaataattttt 162
|||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 aaaataagatcagagtaggtgacattaaaagtaataattttt 362
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
