Query= MSMg01no268_e07.b1 MSMg01no268_e07.b1 CHROMAT_FILE:
MSMg01no268_e07.b1 PHD_FILE: MSMg01no268_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:31 2005
(617 letters)
>mm_chr13_8349801_8350823
Length = 1023
Score = 1131 bits (585), Expect = 0.0
Identities = 608/619 (98%), Gaps = 6/619 (0%)
Strand = Plus / Plus
Query: 5 gaattcctggtgttaatgtttaatctccacttgcttgtttactatgagatccttagttag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctggtgttaatgtttaatctccacttgcttgtttactatgagatccttagttag 264
Query: 65 ctggaatattaagaatgaaactgcagtatccataaactgttgaggaggagatagatggct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctggaatattaagaatgaaactgcagtatccataaactgttgaggaggagatagatggct 324
Query: 125 taagcatcaggtagataatccctcacatgatatggaaagtagctgaaaacattaaagatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taagcatcaggtagataatccctcacatgatatggaaagtagctgaaaacattaaagatg 384
Query: 185 gatgaagggccacttacaaggctcatgtctgagtaagcattgcagacatgcttcaaacgg 244
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 385 gatgaagggccacttacaaggctcatgtctgagtaagcattacagacatgcttcaaacgg 444
Query: 245 gttgtctgcccagctccagaaaccatacttcagcatctctgctctctgtctccatctcca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gttgtctgcccagctccagaaaccatacttcagcatctctgctctctgtctccatctcca 504
Query: 305 tctccatct------ggtctttttctgagccccattttctgaataccgagctgtagaatg 358
||||||||| || ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 505 tctccatctccatctgggctttttctgaggatcattttctgaataccgagctgtagaatg 564
Query: 359 agctgtagcaacaaggtcagacctcagtttactggctgatgagaatatcttccaagactt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agctgtagcaacaaggtcagacctcagtttactggctgatgagaatatcttccaagactt 624
Query: 419 agagataagcaagtaaggatggaatttcagaagacttcagtccaatggcagcccatggat 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agagataagcaagtaaggatggaatttcagaagacttcagtccaatggcagcccatggat 684
Query: 479 ggtgacaagaatgggaaaattggtggaactaagccaagcacccagaacccattatgattg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ggtgacaagaatgggaaaattggtggaactaagccaagcacccagaacccattatgattg 744
Query: 539 gattcgattgatatgtgattcagtccctcacaagttatcaatgattagaagtgatcacta 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gattcgattgatatgtgattcagtccctcacaagttatcaatgattagaagtgatcacta 804
Query: 599 tctttctttaaaaatggcc 617
|||||||||||||||||||
Sbjct: 805 tctttctttaaaaatggcc 823
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1023
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1013
Effective search space: 614891
Effective search space used: 614891
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no268_e07.g1 MSMg01no268_e07.g1 CHROMAT_FILE:
MSMg01no268_e07.g1 PHD_FILE: MSMg01no268_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:31 2005
(608 letters)
>mm_chr13_8489468_8490475
Length = 1008
Score = 1168 bits (604), Expect = 0.0
Identities = 607/608 (99%)
Strand = Plus / Minus
Query: 1 ctcatttgtcagcttgcccctcactctattagctaataacctattagttcttaaataact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 ctcatttgtcagcttgcccctcactctattagctaataacctattagttcttaaataact 749
Query: 61 ggggctgtactcacctaaaaggacacgacagtgaaatgccatctagcagtgcacataatt 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 748 ggggctgtactcacctaaaaggacgcgacagtgaaatgccatctagcagtgcacataatt 689
Query: 121 gtcccctaatgtacatttaatattctgtattcagtttgcttaaagtaggatagaccaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gtcccctaatgtacatttaatattctgtattcagtttgcttaaagtaggatagaccaaat 629
Query: 181 attcaatggaccaaatatgaagaaaaaagtaattttgtgtacactatgctgacaggtttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 attcaatggaccaaatatgaagaaaaaagtaattttgtgtacactatgctgacaggtttt 569
Query: 241 tatggtcatatttaaatgctaatttagacagtatatattcttttgtttttgctcatcttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tatggtcatatttaaatgctaatttagacagtatatattcttttgtttttgctcatcttg 509
Query: 301 actatgatgagagaagtgggtagtttgactcaattgaattaagttccttaaaaatctgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 actatgatgagagaagtgggtagtttgactcaattgaattaagttccttaaaaatctgtg 449
Query: 361 cctgctgcatgtcctggatgggagtgtgaagaaatagtgtcagccacaattttacaattc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 cctgctgcatgtcctggatgggagtgtgaagaaatagtgtcagccacaattttacaattc 389
Query: 421 agaccttgacaaagaactgctatcccaatgacatcatgaaaaatgcctaaaacccaattt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 agaccttgacaaagaactgctatcccaatgacatcatgaaaaatgcctaaaacccaattt 329
Query: 481 gtttccatgtcatcgttgctcccggtcgagttagctcctgtaggtcattttccatttcag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gtttccatgtcatcgttgctcccggtcgagttagctcctgtaggtcattttccatttcag 269
Query: 541 ataacctgtcctattgtctttacaagtacacgtgtacttgtcaagcctgcggtcctaatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ataacctgtcctattgtctttacaagtacacgtgtacttgtcaagcctgcggtcctaatg 209
Query: 601 tttggctc 608
||||||||
Sbjct: 208 tttggctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
