TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCTGATCTCTCCCGGCTTTCTGAAATGTACGAGGTGCTCTGCTCA
GGATGCCCCTGGAGTACAGCAAGGATGTTTCCAGAGGACAGTGGGAGGGA
CTTGTTGTAGCTTCAGTGTCATGGTAATGATGTTTGCCTTTGCATGTTAC
AGACACTCCAGGTTCTATTGGTGCCTGATTAGAAAAGTCCCCATATTACT
AGACCCGCATTGGAATTGAGACTCTGCATCACTAGTTCTCATGGTGTTAG
TTGTAGGACGTGTTGGAGACATGGAAACAATTGTAGGATAATTTCTGGGG
GAAGCTCAATGTGTCTTTCAGTATCTTTACATATGGGGAGTCTGGCAGGG
GCAAAGTGGACTTGAGAAGCAATATCAGTAGTGGGGCAGAGAATGTGATC
TTTGTGTTAGGAGCACTTGGCTCAAGATCATCCAGTATTTGCCATCAAAT
ATTGAATAAGTGAGTTACGCCTTTTCTCAGATTTCTGTTGGTCTAAAAGC
TGCCTCAAAACAAAAACAAAAACAAAACAAAACAAAAAAAAAAACCCTCC
AGGATTTAATGGGATGAAAAGCCTCTTGTAATTGAAAGACGGTATTTCTG
AAAAGGCAGGAGGCTTTTGTGTCTGACATTTTGTATTTTATCACTGTAAT
GCTATCAGACCGTTCCATTACCTAGTAGTCCTGGG

CGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAAGAACACATCAAAACGATCATCCATC
ATGATCAAGTAGGCTTTATCCCACCGATACAGAGATGGTTCAATATATGG
AAATCCATCAATGTAATCCACTATATAAATGAACTCAAAAACAAAAACCA
CATGATCATCTCATTAGACGCTGAGAAAGCATTTGACAAAATCCAACACC
CCTTCATGATAAAAGTCTTGGAAAGATCAGGAATTCAAGGCCCAAACCTA
AACATAATGAAAGCAATATATATTTTAACCAGTAGCCAACATCAAACTAA
ATGGAGAGAAATNNGTACATTCCCANTACATNACCAACTAGACAAGGCTA
ACCACTTTCTCCCTACCTATTCAAACAAAACAAAAAATTCCTAGCCAGAG
CAATTTGACAAAAAAAGGAGATCAAGGGAATACAAATTGGAAAGGAAGAA
GTCAAAATATCACTATTTGCAGATGCTATGATAGTATATATAAGTGAACC
CAAAAATTCTACCAGGGAACTCCTAAACCCGATAAACAACTTCAGTGAAG
TAGCTGGATATAAAATTAACTCAAACAAATCAGTGGCCTTTCTCTACACA
AAGGATAAACAGGCTGAAAAAGAAATTAGAGAAACAACACTCTTCAAAAT
GGTCACAGACAATN

Query= MSMg01no268_h20.b1 MSMg01no268_h20.b1 CHROMAT_FILE:
MSMg01no268_h20.b1 PHD_FILE: MSMg01no268_h20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:47 2005
         (666 letters)



>mm_chr13_19615419_19616483
          Length = 1065

 Score = 1145 bits (592), Expect = 0.0
 Identities = 642/662 (96%), Gaps = 7/662 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctctgatctctcccggctttctgaaatgtacgaggtgctctgctcaggatgcccc 64
           |||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 205 gaattctctgatctctcagggctttctgaaatgttcgaggtgctctgctcaggatgcccc 264

                                                                       
Query: 65  tggagtacagcaaggatgtttccagaggacagtgggagggacttgttgtagcttcagtgt 124
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tggagtacagcaaggatgcttccagaggacagtgggagggacttgttgtagcttcagtgt 324

                                                                       
Query: 125 catggtaatgatgtttgcctttgcatgttacagacactccaggttctattggtgcctgat 184
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatggtaatgatgtttgcctttgcatgttacagacactccaggttctattggtgcctgat 384

                                                                       
Query: 185 tagaaaagtccccatattactagacccgcattggaattgagactctgcatcactagttct 244
           ||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||
Sbjct: 385 tagaaaagtccccatattactagacccacattggaattgggactctgtatcactagttct 444

                                                                       
Query: 245 catggtgttagttgtaggacgtgttggagacatggaaacaattgtaggataatttctggg 304
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 445 catggtgttagttgtaggacgtgttggagacatggaaacagttgtaggataatttttggg 504

                                                                       
Query: 305 ggaagctcaatgtgtctttcagtatctttacatatggggagtctggcaggggcaaagtgg 364
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 505 ggaagctcaatgtgtctttcagtatctttacatatggggagtctggc-ggggcaaagtgg 563

                                                                       
Query: 365 acttgagaagcaatatcagtagtggggcagagaatgtgatctttgtgttaggagcacttg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 acttgagaagcaatatcagtagtggggcagagaatgtgatctttgtgttaggagcacttg 623

                                                                       
Query: 425 gctcaagatcatccagtatttgccatcaaatattgaataagtgagttacgccttttctca 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gctcaagatcatccagtatttgccatcaaatattgaataagtgagttacgccttttctca 683

                                                                       
Query: 485 gatttctgttggtctaaaagctgcctcaaaacaaaaacaaaaacaaaacaaaacaaaaaa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 684 gatttctgttggtctaaaagctgcctcaaaacaaaaacaaaaacaaaacaaaacaaaac- 742

                                                                       
Query: 545 aaaaaccctccaggatttaatgggatgaaaagcctcttgtaattgaaagacggtatttct 604
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 -----ccctccaggatttaatgggatgaaaagcctcttgtaattgaaagacggtatttct 797

                                                                       
Query: 605 gaaaaggcaggaggcttttgtgtctgacattttgtattttatcactgtaatgctatcaga 664
           ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 gaaaaggcaggaggctttcatgtctgacattttgtattttatcactgtaatgctatcaga 857

             
Query: 665 cc 666
           ||
Sbjct: 858 cc 859


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1065
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1055
Effective search space:   692080
Effective search space used:   692080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)