Query= MSMg01no269_c09.b1 MSMg01no269_c09.b1 CHROMAT_FILE:
MSMg01no269_c09.b1 PHD_FILE: MSMg01no269_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:32 2005
(575 letters)
>mm_chr13_70124445_70125418
Length = 974
Score = 1081 bits (559), Expect = 0.0
Identities = 568/571 (99%), Gaps = 1/571 (0%)
Strand = Plus / Plus
Query: 5 gaattctagcaagtatgcatagtgtaccaatataatagttgcacaatgtaccatctccca 64
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctagcaagcatg-atagtgtaccaatataatagttgcacaatgtaccatctccca 263
Query: 65 acggctcaatcaggaagagtactttagatcccaactgtaacaccatttcttcagtagaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acggctcaatcaggaagagtactttagatcccaactgtaacaccatttcttcagtagaaa 323
Query: 125 ctctaaaattacagacacttgcttgctctctctctctctctctccctccctccttctcta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctctaaaattacagacacttgcttgctctctctctctctctctccctccctccttctcta 383
Query: 185 tgtgtgtatgtgtccatgatacactatttcctggcagttgtttatagactggaatgtggg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgtgtgtatgtgtccatgatacactatttcctggcagttgtttatagactggaatgtggg 443
Query: 245 atatagcagcaaccttacatgaatatttcctctaatgaccaaggctttcttctgtcagcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atatagcagcaaccttacatgaatatttcctctaatgaccaaggctttcttctgtcagcc 503
Query: 305 tttcattcattcctgtccgtccaatcaacacctcagggcccgggaagtggcttgatggtg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tttcattcattcctgtccgtccaatcaacacctcagggcccgggaagtggcttgatggtg 563
Query: 365 gaggccgcttttttcttagagttggacatattctaagttgttggagggtctttgctcagt 424
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gaggctgcttttttcttagagttggacatattctaagttgttggagggtctttgctcagt 623
Query: 425 catagatgcccaagaacatgctcaagtgaggcaaagaggggaagttctttatggaactgt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 catagatgcccaagaacatgctcaagtgaggcaaagaggggaagttctttatggaactgt 683
Query: 485 gtgtgttccatccctttgcactgcaactgaaagcatagttcagaagaaacgtgagaagag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gtgtgttccatccctttgcactgcaactgaaagcatagttcagaagaaacgtgagaagag 743
Query: 545 gggttccccaggggaggtcagcaactcctgt 575
|||||||||||||||||||||||||||||||
Sbjct: 744 gggttccccaggggaggtcagcaactcctgt 774
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 974
Length adjustment: 10
Effective length of query: 565
Effective length of database: 964
Effective search space: 544660
Effective search space used: 544660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no269_c09.g1 MSMg01no269_c09.g1 CHROMAT_FILE:
MSMg01no269_c09.g1 PHD_FILE: MSMg01no269_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:33 2005
(287 letters)
>mm_chr13_70265690_70266376
Length = 687
Score = 555 bits (287), Expect = e-162
Identities = 287/287 (100%)
Strand = Plus / Minus
Query: 1 tgagccttctcatctcagaaggggaggaacacacttgaatgaaggactcttgcttcttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tgagccttctcatctcagaaggggaggaacacacttgaatgaaggactcttgcttcttag 428
Query: 61 gtttgttgatttcagtgtttctgtaagttagctaattgcaggaataagcttaattttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gtttgttgatttcagtgtttctgtaagttagctaattgcaggaataagcttaattttttt 368
Query: 121 gctttcctagtcagacaaggaaaataattttcttctaaaattgatgtcctggccgggcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gctttcctagtcagacaaggaaaataattttcttctaaaattgatgtcctggccgggcac 308
Query: 181 agacctaaaagaaccacgtgtattccctcacagtccagaggaaattagttctggcaatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 agacctaaaagaaccacgtgtattccctcacagtccagaggaaattagttctggcaatat 248
Query: 241 gtgcatgggcgagcagacagaagactcgggtccatcatgtttttacc 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gtgcatgggcgagcagacagaagactcgggtccatcatgtttttacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
