Query= MSMg01no269_p12.b1 MSMg01no269_p12.b1 CHROMAT_FILE:
MSMg01no269_p12.b1 PHD_FILE: MSMg01no269_p12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:31 2005
(328 letters)
>mm_chr13_110111866_110112593
Length = 728
Score = 596 bits (308), Expect = e-175
Identities = 320/324 (98%)
Strand = Plus / Minus
Query: 5 gaattcaatagagccaactgaagcttggcatgcttcgctaaagttaccatatgttggcat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 gaattcaatagagccaactgaagcttggcatgcttcgctaaagttaccatatgttggcat 469
Query: 65 tagggataagaaccagaaatgccctctatcaggaatgagagcaagcatctaccctgccta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tagggataagaaccagaaatgccctctatcaggaatgagagcaagcatctaccctgccta 409
Query: 125 ggtttttcttttattgctatttactgtgttttaaggggcttactctttcttatgttgtta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ggtttttcttttattgctatttactgtgttttaaggggcttactctttcttatgttgtta 349
Query: 185 gaagaaaccaagtctacaatatatcattttttcctgaaggacataacatgtttatagata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gaagaaaccaagtctacaatatatcattttttcctgaaggacataacatgtttatagata 289
Query: 245 tagtttcaatatagttgtaagaggggtaggaagaaaaaatactgaacactagaaattatt 304
|| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 taatttcaatatagttgcaagaggggtaggaagaaaaaatactgaacactagaaattatt 229
Query: 305 gcttctttatttattcttatttct 328
||||||||||||| |||||||||
Sbjct: 228 gcttctttatttagccttatttct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 728
Length adjustment: 9
Effective length of query: 319
Effective length of database: 719
Effective search space: 229361
Effective search space used: 229361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no269_p12.g1 MSMg01no269_p12.g1 CHROMAT_FILE:
MSMg01no269_p12.g1 PHD_FILE: MSMg01no269_p12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:32 2005
(606 letters)
>mm_chr13_109965081_109966085
Length = 1005
Score = 1081 bits (559), Expect = 0.0
Identities = 591/602 (98%), Gaps = 1/602 (0%)
Strand = Plus / Plus
Query: 1 taagtgaaagaccctggataaagaccctggatatccagaccaaaaaaccgaaacgggaag 60
|||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 201 taagtgaaagaccctggataaagaccctagatatccagaccaaaaaa-agaaacgggaag 259
Query: 61 ctgctcagatggtagagatttcagagatgagcttgagaaagcattcaggagcatagagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ctgctcagatggtagagatttcagagatgagcttgagaaagcattcaggagcatagagag 319
Query: 121 caaatagagcagacaagaagaaagagtattcttaatggtcatagttggaatatccatctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 caaatagagcagacaagaagaaagagtattcttaatggtcatagttggaatatccatctc 379
Query: 181 gagatgtgcccagaaggagatgaacatgctgatgtacgtatagtttgactggagcagcca 240
|||||||||||||||||||| ||||| ||||||||| |||||| |||||||||||||||
Sbjct: 380 gagatgtgcccagaaggagaagaacacactgatgtacatatagtctgactggagcagcca 439
Query: 241 aatttataacttctgctatgctgggcattgtgtttctagccgtgcaggctccaattacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aatttataacttctgctatgctgggcattgtgtttctagccgtgcaggctccaattacag 499
Query: 301 gacttatattggaagttgttatctctcctatccccactgcgatttcccatccactgccac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gacttatattggaagttgttatctctcctatccccactgcgatttcccatccactgccac 559
Query: 361 tcaccactcacatggctgaatatgactcgcacaaatggagagagtaggtgggtatgatgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcaccactcacatggctgaatatgactcgcacaaatggagagagtaggtgggtatgatgc 619
Query: 421 aaggagctattaaaatgattcacatcacattcctaccacgagaaaaaaaatatatagtca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aaggagctattaaaatgattcacatcacattcctaccacgagaaaaaaaatatatagtca 679
Query: 481 aaggcaacgctgcatcagaccacagatcatcttgaagaagtctaaattacacgtctgaca 540
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aaggcaatgctgcatcagaccacagatcatcttgaagaagtctaaattacacgtctgaca 739
Query: 541 tccagcctttcattggaatgtgatcatctggacaggccgganaatgtatctcttgatttc 600
||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 740 tccagcctttcataggaatgtgatcatctggacaggccggaaaatgtatctcttgatttc 799
Query: 601 cc 602
||
Sbjct: 800 cc 801
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1005
Length adjustment: 10
Effective length of query: 596
Effective length of database: 995
Effective search space: 593020
Effective search space used: 593020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
