XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTTTAATGTTCCAAGACAATTTTTAAAAAACTAAAGATAATTTTCTCCTT
CTGAAAGAAGGATTCATTCCACCCCTGAGCACTAGCATAGAGATTTGCTT
GTTTATTCTAATCACATGTATATGTGTGTGATTGTGTGTGGGTATGTTCA
TGTGTGTGCAGGTGCCTGCAGGAGGCTGAAGAGGGTGTCAGAGCTGCTGA
AGTGAGAGTCTTACGCAGTTGTGAGATACCCTGTGTGGGTGCCAGGAAGC
CAAATGGGTTCTCTGGAATATGCTTTTAACCACTGAGTTAACTCTCCAGC
CCTGAGAATCTCTTGTTAAATAAACAAAAGATTCCTATATAGGAGAGCTA
GGGGATCCACATTTGTTTGTAGAGGTAAAAGAATTCTTTAATGCTACAAG
ACAATTTTAAGAAACTACAGCTTGTCCAAAGAGACATCATGGGAAATGCT
TTGTTTCAATAGTTGACTATCTTGCAAGATACCTGTCAGGNTGAATGTAA
AATAAAGGAGATGGGAGGAAGGAGGCAGAGGGTCCCTGAATCTCTTTCAT
GAAAAGAGACTTACTAAAATTATCTAAGTGAACCCTGCCCCGTGTTTAGA
AGCAGAGGTCAGGAAAAGACAATCTTCCTAGTAACAGGTCAACCCCTAGA
CGGTCTTATTATGGATTAATGAAATGCCAGGTTN

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCTGA
GAAGCACCTGAATATATGTCCAGCATCCTTAATCATCAGGGAAATGCAAA
TCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGTTAAGATC
AAAATTCAGGTGACAGCAGATGCTGGTGAGGATGTGGAGAAAGAGGAACA
CTCCTCCATTGCTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATC
AGTCTGGCGGTTCCTCATAAAATTGGACATAGTACTACCAGAGGATCCTG
CAATACCCCTCCTGGGCATATATCCAGGAGAAGTTCCAACTGGTAATAAG
GACACATGCTCCACTATGCTCATAGCAGCCTTATTTATAATAGCCAGAAG
CTGGAAAGAAGTCAGATGCTCCTCAACAGAGGAATGGATACAGAAGATGT
GGTACATTTACACAATGGAGTACTACTCAGCTATTAAAAAGGCTGAATTT
ATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGTATCATCCTCAGAGA
GGTAAACCAATCACAAAAGAACTCACATGATATGTACTCACTGATAAGTG
GATATTAGCCCAGAAACTTCGAATACCCAATATACAACTTGCAAAACACA
TGAAACTCAAGAAGAATGAAGACTAAAGTGTGGTCACT

Query= MSMg01no270_f09.b1 MSMg01no270_f09.b1 CHROMAT_FILE:
MSMg01no270_f09.b1 PHD_FILE: MSMg01no270_f09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:58 2005
         (523 letters)



>mm_chr13_8758850_8759771
          Length = 922

 Score =  959 bits (496), Expect = 0.0
 Identities = 516/523 (98%), Gaps = 1/523 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   caatttttaaaaaactaaagataattttctccttctgaaagaaggattcattccacccct 60
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caattttt-aaaaactaaagataattttctccttctgaaagaaggattcattccacccct 259

                                                                       
Query: 61  gagcactagcatagagatttgcttgtttattctaatcacatgtatatgtgtgtgattgtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gagcactagcatagagatttgcttgtttattctaatcacatgtatatgtgtgtgattgtg 319

                                                                       
Query: 121 tgtgggtatgttcatgtgtgtgcaggtgcctgcaggaggctgaagagggtgtcagagctg 180
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tatgggtatgttcatgtgtgtgcaggtgcctgcaggaggctgaagagggtgtcagagctg 379

                                                                       
Query: 181 ctgaagtgagagtcttacgcagttgtgagataccctgtgtgggtgccaggaagccaaatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctgaagtgagagtcttacgcagttgtgagataccctgtgtgggtgccaggaagccaaatg 439

                                                                       
Query: 241 ggttctctggaatatgcttttaaccactgagttaactctccagccctgagaatctcttgt 300
           |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 440 ggttctctggaagatgcttttaaccactgagttaactctccagccctgagaatcacttgt 499

                                                                       
Query: 301 taaataaacaaaagattcctatataggagagctaggggatccacatttgtttgtagaggt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 taaataaacaaaagattcctatataggagagctaggggatccacatttgtttgtagaggt 559

                                                                       
Query: 361 aaaagaattctttaatgctacaagacaattttaagaaactacagcttgtccaaagagaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aaaagaattctttaatgctacaagacaattttaagaaactacagcttgtccaaagagaca 619

                                                                       
Query: 421 tcatgggaaatgctttgtttcaatagttgactatcttgcaagatacctgtcaggntgaat 480
           |||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 620 tcatgggaaatgctttttttcaatagttgactgtcttgcaagatacctgtcagggtgaat 679

                                                      
Query: 481 gtaaaataaaggagatgggaggaaggaggcagagggtccctga 523
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gtaaaataaaggagatgggaggaaggaggcagagggtccctga 722



 Score =  101 bits (52), Expect = 2e-25
 Identities = 70/76 (92%), Gaps = 4/76 (5%)
 Strand = Plus / Plus

                                                                       
Query: 328 agag-ctaggggatccacatttgtttgtagaggtaaaagaattctttaatgctacaagac 386
           |||| ||||||||| || |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 143 agagactaggggat-caaatttgtttatagaggtaaaagaattctttaatgctacaagac 201

                           
Query: 387 aatttt-aagaaacta 401
           |||||| || ||||||
Sbjct: 202 aatttttaa-aaacta 216


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 523
Length of database: 922
Length adjustment: 10
Effective length of query: 513
Effective length of database: 912
Effective search space:   467856
Effective search space used:   467856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)