Query= MSMg01no271_a07.b1 MSMg01no271_a07.b1 CHROMAT_FILE:
MSMg01no271_a07.b1 PHD_FILE: MSMg01no271_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:48 2005
(294 letters)
>mm_chr13_58717752_58718441
Length = 690
Score = 528 bits (273), Expect = e-154
Identities = 285/291 (97%), Gaps = 4/291 (1%)
Strand = Plus / Minus
Query: 1 gtgaactaaggtgggtctgctgcccactcacagagtaagccatcctctgaatgttacaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gtgaactaaggtgggtctgctgcccactcacagagtaagccatcctctgaatgttacaga 428
Query: 61 caatcgataatactggtaagaggaaaagctatctcggcacacctttctcagaatgggttt 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 caatcgataatactagtaagaggaaaagctatctcggcacacctttctcagaatgggttt 368
Query: 121 cctggaaggtccttattgacccagagggttactgtttgttgaggctaagggaagtcagga 180
|||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 367 cctggaaggtccttattgacacagagggttactgtt----gaggctaagggaagtcagga 312
Query: 181 caagtccctgtttgtcctctcctacctctgacaaccttatctgcctaggtgcaatgttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 caagtccctgtttgtcctctcctacctctgacaaccttatctgcctaggtgcaatgttcc 252
Query: 241 cattcttctagacacatccaaggtgggaagcagtccatacctcatcaagga 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 cattcttctagacacatccaaggtgggaagcagtccatacctcatcaagga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 690
Length adjustment: 9
Effective length of query: 285
Effective length of database: 681
Effective search space: 194085
Effective search space used: 194085
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no271_a07.g1 MSMg01no271_a07.g1 CHROMAT_FILE:
MSMg01no271_a07.g1 PHD_FILE: MSMg01no271_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:49 2005
(289 letters)
>mm_chr13_58547630_58548320
Length = 691
Score = 389 bits (201), Expect = e-112
Identities = 231/241 (95%), Gaps = 4/241 (1%)
Strand = Plus / Plus
Query: 52 aagtgtaagccaccaagcccagtggctcgctgctagtgtccttaaagttttcttccagtt 111
|||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||
Sbjct: 252 aagtgtaagccaccaagcccagtggctcactgctagtgttcttaaacttttcttccagtt 311
Query: 112 gcctctgactcctctgatgaagacaaacagaggagcagcgacttctttgtaggaaaagaa 171
||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 312 gcctctgactcctctgatgaagacaaaaagaggagcagtgacttctttgtaggaaaagaa 371
Query: 172 actgaaaacatc-tgg-catttaaaaa-gtggatctcagggctcaaagcactaagttggt 228
|||||||||| | ||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 372 actgaaaaca-cgtgggcatttaaaaaagtggatctcagggctcaaagcactaagttggt 430
Query: 229 gtcactatggttgggttccccacctgaaagaaactagccaaagtgcgaacttttggttcc 288
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 431 gtcactatggttgggttccccacctgaaagaaactagccaaagtgcgaacttttagttcc 490
Query: 289 a 289
|
Sbjct: 491 a 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 691
Length adjustment: 9
Effective length of query: 280
Effective length of database: 682
Effective search space: 190960
Effective search space used: 190960
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
