Query= MSMg01no271_k08.b1 MSMg01no271_k08.b1 CHROMAT_FILE:
MSMg01no271_k08.b1 PHD_FILE: MSMg01no271_k08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:34 2005
(350 letters)
>mm_chr13_85705544_85706292
Length = 749
Score = 661 bits (342), Expect = 0.0
Identities = 348/350 (99%), Gaps = 1/350 (0%)
Strand = Plus / Minus
Query: 1 ccaaattattttccagcctcctgtttccctgaaccctgcaactctccatacaagatcctg 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 352 ccaaattattttccagcctcctgtttccctgaaccctgcaactctcc-tacaagatcctg 294
Query: 61 acttgaactgtccactccatcaatgtgaaaagctacacagttacacagtaccagacctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 acttgaactgtccactccatcaatgtgaaaagctacacagttacacagtaccagacctga 234
Query: 121 cttgagggactgtcctctgataaaggcagagtggacctggtttacagatgggagcaactt 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 233 cttgagggactgtcctctgatagaggcagagtggacctggtttacagatgggagcaactt 174
Query: 181 catccatgagggtcagaggagagcatggatggcagtgactacagaaatggaggtattctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 catccatgagggtcagaggagagcatggatggcagtgactacagaaatggaggtattctg 114
Query: 241 cctcattctcttcctccaggcacttcagctcaaagggctgagctaacagcagtaacacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 cctcattctcttcctccaggcacttcagctcaaagggctgagctaacagcagtaacacag 54
Query: 301 gccctcaccatggagaaaagactggctgttaacatctacacagagagcta 350
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 gccctcaccatggagaaaagactggctgttaacatctacacagagagcta 4
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 749
Length adjustment: 9
Effective length of query: 341
Effective length of database: 740
Effective search space: 252340
Effective search space used: 252340
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no271_k08.g1 MSMg01no271_k08.g1 CHROMAT_FILE:
MSMg01no271_k08.g1 PHD_FILE: MSMg01no271_k08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:34 2005
(528 letters)
>mm_chr13_85551249_85552176
Length = 928
Score = 928 bits (480), Expect = 0.0
Identities = 516/528 (97%)
Strand = Plus / Plus
Query: 1 cttgactctcttaattattttgagttcatttgggtggcagagctgaccaccctggccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 cttgactctcttaattattttgagttcatttgggtggcagagctgaccaccttggccttt 260
Query: 61 acaacatgacacagggacatgaacatgatttggaagttagtcctgttttaaaattctaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaacatgacacagggacatgaacatgatttggaagttagtcctgttttaaaattctaac 320
Query: 121 tctgatgttggctggctctactacactggaaaaataatttgaatttcttgagctaaattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgatgttggctggctctactacactggaaaaataatttgaatttcttgagctaaattt 380
Query: 181 cccaaaatgttataacaatacatcaaataaagcatataaataatttaatacactataact 240
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 381 cccaaaatgttataacaatacattaaataaagcatataaataatttaatacactgtaact 440
Query: 241 caatagaaactcgatgagatacacctactctcttttctttagtacctgtctttactctta 300
|| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagtagaaacacgatgaaatacacctactctcttttctttagtacctgtctttactctta 500
Query: 301 ccttactttttactattgcttggtgatagcctagcaactggccgatcactgactttcagt 360
||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 ccttagtttttactgttgcttggtgatagcctagcaactgggtgatcactgactttcagt 560
Query: 361 actgcagtgacattttgtagcattgtttatttaattcatgctgaaagcttacccacccac 420
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 561 actgcagtgacattttgtagcattgtttatttaattcatgctgaacgcttacccacccac 620
Query: 421 acacaggccagagaaagggaaacaaacatctactgttctgaagagtgttctcataaaggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acacaggccagagaaagggaaacaaacatctactgttctgaagagtgttctcataaaggg 680
Query: 481 agagttggaaaaaaagtaactaaattcaaagccaaagagaggcaatga 528
|||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 681 agagttggaaaaaaagtaactaaattcaaagccaaagagaggaaatga 728
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space: 475524
Effective search space used: 475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
