Query= MSMg01no273_d19.b1 MSMg01no273_d19.b1 CHROMAT_FILE:
MSMg01no273_d19.b1 PHD_FILE: MSMg01no273_d19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:34 2005
(319 letters)
>mm_chr13_56953235_56953954
Length = 720
Score = 547 bits (283), Expect = e-160
Identities = 308/317 (97%), Gaps = 3/317 (0%)
Strand = Plus / Plus
Query: 5 gaattctccctgcttcac--ttgtttatgtagaacaaacaggttaaaaaaagagtttaac 62
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctccctgca-cacatttgtttatgtagaacaaacaggttaaaaaaagagtttaac 263
Query: 63 agcctgccagtaagacagctccataggagtttcagtagactgtgtgtcccctcaccctgt 122
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agcctgccagtaagacaggtccataggagtttcagtagactgtgtgtcccctcaccctgt 323
Query: 123 tttcttttttgcaagctgggaagggcaggatgtggggatgcagtgataactcaggctgtt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttcttttttgcaagctgggaagggcaggatgtggggatgcagtgataactcaggctgtt 383
Query: 183 gtgatgggagcaggccagaatagcattcagtgatttcttccattgacttgaaactctcag 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtgatgggagcaggccagaatagcattcagtgatttcttccattgacttgaaactctcag 443
Query: 243 gaaaggtccccgctgcatctctatgactgcaggatccattgttattcacctctctgcttc 302
||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 444 gaaaggtccccactgcatctctatgactgcaggatccactgggattcacctctctgcttc 503
Query: 303 atctatgagactggtgg 319
|||||||||||||||||
Sbjct: 504 atctatgagactggtgg 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 720
Length adjustment: 9
Effective length of query: 310
Effective length of database: 711
Effective search space: 220410
Effective search space used: 220410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_d19.g1 MSMg01no273_d19.g1 CHROMAT_FILE:
MSMg01no273_d19.g1 PHD_FILE: MSMg01no273_d19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:34 2005
(291 letters)
>mm_chr13_57123176_57123866
Length = 691
Score = 514 bits (266), Expect = e-150
Identities = 284/290 (97%)
Strand = Plus / Minus
Query: 1 ttactgtgaaaaatcccggaataccaaggaaggaaggctctgtgtgtaccacgaataatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 445 ttactgtgaaaaatcccggaataccaaggaaggaaggctctgtgtgtaccaagaataatg 386
Query: 61 atgctgttctgtggactcagggtcaccctggggtgtcctccagtgacacaatttacatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atgctgttctgtggactcagggtcaccctggggtgtcctccagtgacacaatttacatag 326
Query: 121 cctacatgtttgagttttatttttagggcatgctgatatgtctcccaacaaacttccagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cctacatgtttgagttttatttttagggcatgctgatatgtctcccaacaaacttccagt 266
Query: 181 ctgatgtgtttgttctatagataagaaaaccttgtcaaagcatggtggtatgtgtctttg 240
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 265 ctgatgtgtttgttctatagataagaaaaccttgtcaaagcatggcggtatatgtctttg 206
Query: 241 atggactatgatttcaaggccagcctggtcaacatagtgagtttcacgtc 290
||||||| ||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 205 atggactgtgagttcaaggccagcctggtcaacatagtaagtttcacgtc 156
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
