Query= MSMg01no275_e08.b1 MSMg01no275_e08.b1 CHROMAT_FILE:
MSMg01no275_e08.b1 PHD_FILE: MSMg01no275_e08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:59 2005
(690 letters)
>mm_chr2_119373730_119374819
Length = 1090
Score = 1326 bits (686), Expect = 0.0
Identities = 686/686 (100%)
Strand = Plus / Minus
Query: 5 gaattccgtagttccctgtactccttggcacgatctgccactgggttatttgctcacatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 gaattccgtagttccctgtactccttggcacgatctgccactgggttatttgctcacatt 831
Query: 65 atcatcaaagacaggtaccatgaagacatggcttacgaaaatcaaagagagccgcaaagg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 atcatcaaagacaggtaccatgaagacatggcttacgaaaatcaaagagagccgcaaagg 771
Query: 125 atcactgagaaagcattgtagccatacaattgtatcatacactaccaagggcctttcaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 atcactgagaaagcattgtagccatacaattgtatcatacactaccaagggcctttcaaa 711
Query: 185 ggtatggaggtgttttctgtgcttctcaattcccaaagccctgttgctcctttgttcagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 ggtatggaggtgttttctgtgcttctcaattcccaaagccctgttgctcctttgttcagg 651
Query: 245 ttaacaaggaagaaactagagtatgtatgtttctggtacaaattcacagattttggagta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ttaacaaggaagaaactagagtatgtatgtttctggtacaaattcacagattttggagta 591
Query: 305 catccaatttcaatatcaattgcataaagtacagcaacacagcagatatcaatatatata 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 catccaatttcaatatcaattgcataaagtacagcaacacagcagatatcaatatatata 531
Query: 365 aaaataggacaaatgtcttcactgtgtctttaaaccttgaccactatacccgtggctttt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aaaataggacaaatgtcttcactgtgtctttaaaccttgaccactatacccgtggctttt 471
Query: 425 ctccaacgattcagatttaaaagcctcactcgggtttttggactcttgattgcttagagg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ctccaacgattcagatttaaaagcctcactcgggtttttggactcttgattgcttagagg 411
Query: 485 tcttcagttcctggtcacaagcctttctctatgatcttctttgttgagtttttccctgtg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tcttcagttcctggtcacaagcctttctctatgatcttctttgttgagtttttccctgtg 351
Query: 545 tgtgattttagtagttttagctcttgctcagaaacctcattaggatgtataacgttttct 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tgtgattttagtagttttagctcttgctcagaaacctcattaggatgtataacgttttct 291
Query: 605 ccaggaaccattcacatttcctggatttgcttctactttatctactgttcaggatgcttc 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ccaggaaccattcacatttcctggatttgcttctactttatctactgttcaggatgcttc 231
Query: 665 tgtaggaggaaccataaggaagaaaa 690
||||||||||||||||||||||||||
Sbjct: 230 tgtaggaggaaccataaggaagaaaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1090
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1080
Effective search space: 734400
Effective search space used: 734400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_e08.g1 MSMg01no275_e08.g1 CHROMAT_FILE:
MSMg01no275_e08.g1 PHD_FILE: MSMg01no275_e08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:59 2005
(285 letters)
>mm_chr13_67823956_67824639
Length = 684
Score = 543 bits (281), Expect = e-159
Identities = 284/285 (99%), Gaps = 1/285 (0%)
Strand = Plus / Plus
Query: 1 tttctaaaactattaacggtgtgtcagtaaacctgaatgtcatattgcagggacaaagga 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 tttctaaaactattaacggtgtgtcagtaaacctgaatgtcatattg-agggacaaagga 259
Query: 61 aaatttaagagagttcagacaatgctgataacgtgaacacaaagaagaaaagcacgtgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaatttaagagagttcagacaatgctgataacgtgaacacaaagaagaaaagcacgtgaa 319
Query: 121 gagacaacaatgtacagagtctggcagattagagagcaatgtacagatcgtgacagagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gagacaacaatgtacagagtctggcagattagagagcaatgtacagatcgtgacagagta 379
Query: 181 gagagcaatgtacagagcctggcagattacagatgaacagagccatttcccccttccctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gagagcaatgtacagagcctggcagattacagatgaacagagccatttcccccttccctt 439
Query: 241 tcagactttccagccccaccctgccatttctcatcacaccaagtc 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcagactttccagccccaccctgccatttctcatcacaccaagtc 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 684
Length adjustment: 9
Effective length of query: 276
Effective length of database: 675
Effective search space: 186300
Effective search space used: 186300
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
