Query= MSMg01no275_o05.b1 MSMg01no275_o05.b1 CHROMAT_FILE:
MSMg01no275_o05.b1 PHD_FILE: MSMg01no275_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:42 2005
(579 letters)
>mm_chr13_10741344_10742322
Length = 979
Score = 543 bits (281), Expect = e-158
Identities = 311/331 (93%), Gaps = 17/331 (5%)
Strand = Plus / Minus
Query: 5 gaattctaggaatggcaagtggtgatggtttcccatctggtagctcaaaaaaatgcttgt 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gaattctaggaatgggaagtggtgatggtttcccatctggtagctcaaaaaaatgcttgt 261
Query: 65 acatccatatacaagtaatcccactcctatttgtcgtccctcagacacgtggaaatacac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 acatccatatacaagtaatcccactcctatttgtcgtccctcagacacgtggaaatacac 201
Query: 125 at------acacacacacacacacacaccactaagatgtttatttgaaaagattaaaata 178
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 atacacacacacacacacacacacacaccactaagatgtttatttgaaaagattaaaata 141
Query: 179 gttttgtgctatgtgtaaagtagaaacttaagggtttttttttttttttttttttttttt 238
||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 140 gttttgtgctatgtgtaaagtagaaacttaagg-----------attttttttttttttt 92
Query: 239 ttaaaaagtcagttgtgttggatggtgtttggctggggcaaacacatgagagagtgtttt 298
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 ttagaaagtcagttgtgttggatggtgtttggctggggcaaacacatgagagagtgtttt 32
Query: 299 cctgaagcagacatagatgaaagagtaaggc 329
|||||||||||||||||||||||||||||||
Sbjct: 31 cctgaagcagacatagatgaaagagtaaggc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space: 551361
Effective search space used: 551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_o05.g1 MSMg01no275_o05.g1 CHROMAT_FILE:
MSMg01no275_o05.g1 PHD_FILE: MSMg01no275_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:42 2005
(642 letters)
>mm_chr13_10593104_10594139
Length = 1036
Score = 1168 bits (604), Expect = 0.0
Identities = 630/642 (98%), Gaps = 6/642 (0%)
Strand = Plus / Plus
Query: 1 ttgctgaaaacattcagtcaatgggtctgaattaatttagaaatgaacgtacctaaaagc 60
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 ttgctgaaaacattcagtcaatgggtctgaattaatttagaaatgaaaatacctaaaagc 260
Query: 61 agtgaatcttcacagatatttgtatgtgttgtactgtattgagaaaaaccacatcaactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtgaatcttcacagatatttgtatgtgttgtactgtattgagaaaaaccacatcaactt 320
Query: 121 acagtgagatatgtaaatagggcatgccttttaattataaagttttgatgtgagtatatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagtgagatatgtaaatagggcatgccttttaattataaagttttgatgtgagtatatg 380
Query: 181 tgccacaatgcataaactgtggaggtcagaggaaaatttgcaggaatcgccttctatact 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgccacaatgcataaactgtggaggtcagaggaaaatttgcaggaatcgccttctatacc 440
Query: 241 cagtttctgtggatcaaactcagaccctcaggctttgtacccatggaaccatcttgctgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagtttctgtggatcaaactcagaccctcaggctttgtacccatggaaccatcttgctgg 500
Query: 301 tccacaataatttttgtttttcatgtttcatctccctcctgcatctttttttgtttgttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tccacaataatttttgtttttcatgtttcatctccctcctgcatctttttttgtttgttt 560
Query: 361 gtttgtttgctattggaggccttgcttggagttgaagatgctgcgggaaggaggtccttg 420
|||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 561 gtttgtttgctattggagaccttgctttgagttgaagatgctgggggaaggaggtccttg 620
Query: 421 gtttctgtgaagatgattgagttggtttggttttggttttatgtttcacttctcacctta 480
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 621 gtttctgtgaagatgattgagttggtttggtttt------atgtttcacttctcacctta 674
Query: 481 ctgattaatagtaacaactagacaacatttctgtctctacgatactgtgatatttactgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 ctgattaatagtaacaactagacaacatttctgtctctacgatactgtgatatttactgc 734
Query: 541 aaatacatctgttatctctctgtgtgtgtttgaaattattactgaactattttcatccag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 aaatacatctgttatctctctgtgtgtgtttgaaattattactgaactattttcatccag 794
Query: 601 taatatttatattataaaatctgtatttccaacttcttttga 642
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 taatatttatattataaaatctgtatttccaacttcttttga 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1036
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1026
Effective search space: 648432
Effective search space used: 648432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
