Query= MSMg01no288_a06.b1 MSMg01no288_a06.b1 CHROMAT_FILE:
MSMg01no288_a06.b1 PHD_FILE: MSMg01no288_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:00 2005
(321 letters)
>mm_chr13_59612240_59612960
Length = 721
Score = 511 bits (264), Expect = e-149
Identities = 294/304 (96%), Gaps = 1/304 (0%)
Strand = Plus / Minus
Query: 18 ttatatattttttaaaagttagttattttttattatttataaaacacttacttgaaagaa 77
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 721 ttatatattttttaaaagttagttattttttattatttataaaacacttacttg-aagaa 663
Query: 78 atattttttgttttgttttgttttttgagacagggtttctccgtgtagccctggctgtcc 137
||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 662 ataatttttgttttgttttgttttttaagacagggtttctccgtgtagccctggctgtcc 603
Query: 138 tgaaactcactctgtagaccaggctggccttgaactcagagatccgcctgcctctgcctc 197
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tgaaactcactctgtagaccaggctggccttgaactcagagatccgcctgcctctgcctt 543
Query: 198 ccaagtgctgggattaaaggccactaacaccttcctcccagcttgaaataaacattttaa 257
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 542 ccaagtgctgggattaaaggccactaacacctccctcccagcttgaaataaacattttaa 483
Query: 258 aagagcctccaagtaattgttattttctgaatctttaatatgggtttattaatggcatat 317
|||||||||||||||||||| ||||| ||||||| || ||||| ||||||||||||||||
Sbjct: 482 aagagcctccaagtaattgtcattttttgaatctctagtatggatttattaatggcatat 423
Query: 318 atca 321
||||
Sbjct: 422 atca 419
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no288_a06.g1 MSMg01no288_a06.g1 CHROMAT_FILE:
MSMg01no288_a06.g1 PHD_FILE: MSMg01no288_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:00 2005
(291 letters)
>mm_chr13_59433551_59434241
Length = 691
Score = 507 bits (262), Expect = e-148
Identities = 283/290 (97%)
Strand = Plus / Plus
Query: 1 tccttaaaccatttgttccaaatgagcaggcttgaacctgttttggtggactgtggccca 60
|||||||| |||||||||||||||||||||||||| ||||| |||||||| |||||||||
Sbjct: 201 tccttaaagcatttgttccaaatgagcaggcttgagcctgtcttggtggagtgtggccca 260
Query: 61 tctctgagatgaccccagtgcatatttgctagtatgctaatgcaaagtacttgttttgat 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 tctctgagatgaccccagtgcatatttgctagtatgctgatgcaaagtacttgttttgat 320
Query: 121 gctcaaacccagggcccagtgattgctgggccagttcccctctcctgtccctggacctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctcaaacccagggcccagtgattgctgggccagttcccctctcctgtccctggacctgt 380
Query: 181 ttttattggcctgaacctctgcagaagccacactttccatggcctcaattctgtatctcg 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 ttttattggcctgaacctctgcagaaaccacactttccatggcctcaattctgtatctcg 440
Query: 241 ccttacaacctatatggtctcttttccatgggctttctctatttcctgag 290
||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 ccttacaacctatatggtctcttttccatcggctttctctatttcctgag 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
