Query= MSMg01no289_a06.b1 MSMg01no289_a06.b1 CHROMAT_FILE:
MSMg01no289_a06.b1 PHD_FILE: MSMg01no289_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:14 2005
(258 letters)
>mm_chr13_60771643_60772300
Length = 658
Score = 354 bits (183), Expect = e-102
Identities = 227/243 (93%), Gaps = 8/243 (3%)
Strand = Plus / Minus
Query: 5 gaattcttccttcagttcccatctctgcgccagagagtaaatgaaggagagaaagtggaa 64
|||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 394 gaattcttccctcagttcccatctctgcgccagagggtaaatgaaggagagaaagtggaa 335
Query: 65 ggagaaagggaagagagaaagcagaaattcttaaagtgaaaccagtctttgtgggggagg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ggagaaagggaagagagaaagcagaaattcttaaagtgaaaccagtctttgtgggggagg 275
Query: 125 gggcacatacacgtggcagccagaggtcaaccctgaatggctttctctagctgccgtttt 184
||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 274 gggaacatacatgtggcagccagaggtcaaccctgaatggctttctccagctgccgtttt 215
Query: 185 ccttggttttgttgtttttgtttttgtttttgttttttgggttttttgttttgttttgtt 244
||||| |||| ||||| ||||| ||||||| ||||||| |||||| |||| |||| ||
Sbjct: 214 ccttgttttt-ttgttgttgttgttgtttt-gtttttt---tttttt-tttt-tttt-tt 163
Query: 245 ttt 247
|||
Sbjct: 162 ttt 160
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 258
Length of database: 658
Length adjustment: 9
Effective length of query: 249
Effective length of database: 649
Effective search space: 161601
Effective search space used: 161601
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no289_a06.g1 MSMg01no289_a06.g1 CHROMAT_FILE:
MSMg01no289_a06.g1 PHD_FILE: MSMg01no289_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:15 2005
(291 letters)
>mm_chr13_60572231_60572921
Length = 691
Score = 530 bits (274), Expect = e-155
Identities = 286/290 (98%)
Strand = Plus / Plus
Query: 1 ctacgtaggagcgaaggagaaacaagagggagggtgtgggaggcacgagcgatgactgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctacgtaggagcgaaggagaaacaagagggagggtgtgggaggcacgagcgatgactgtt 260
Query: 61 caaactatggagagcccagaaaaagctttcagaagaagagctatcctccaacactaccct 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaactatggagagcccaggaaaagctttcagaagaagagctatcctccaacactaccct 320
Query: 121 cgggttgctgaacgacaaatgtggtctccaagcaaaggccaaataagaactgaatgtaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgggttgctgaacgacaaatgtggtctccaagcaaaggccaaataagaactgaatgtaag 380
Query: 181 aggcagcatgatttaaaacagtgcctgggaccagccttagcatctcgaaggagatgtgct 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 aggcagcatgatttaaaacagtgcctcggaccagccttagcatctcgaaggagatgtgct 440
Query: 241 ataaaactgactctcagcgcaaagaatagaggcgcctgcctcacaggagc 290
||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 441 ataaagctgactctcagcccaaagaatagaggcgcctgcctcacaggagc 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
