TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCAACTGATGCCCACCAAAGGGCTGAGAAGCACCTGAAAAAATG
TATGGCATCTTTAATCATCAGGGAACCGCAAATCAAAACAACCCTGAGAT
TCCACCTCACACCAGTCAGAATGGCTAGGATCAAAAATTCAAGTGGCAGC
AGATGCTGGCAAGGATATGGAGAAAGAGGAACACTCCTCCATTGCTGGTG
GAATTGCAAATTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCA
GAAAATTGGACATAGTACTACTGGAAGATTCAGCAATACCTCTCCTGGGC
ATATACTCAGAAGATTTTTTTTCTGGCAACAACGCACACATGCTCCACTA
TGTTCATAGCAGCCTTGTTTATAATAGCCAGAAACTGGAAAGAACCAAGA
TGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATATACACAAT
GGAATACTACTCAGCTATTAAAAACAATGAATTTATGAAATTCGTAGGCA
AATGGATGTATCTGGAGGATATCATCCTGAGTGAAGTAATCCAATCACAA
AAGAATTAACTTGATGTACAGTCACTGATAAGAGGCTATTGGCCCAGAAA
CTTCAAATACTCAAGATGTAATTTGTAAAACACAGGATAGTCAAGAAGAC
AAAAGAAGACCAACCTGTGGATACTTCATTCCTCCTTAA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTATTTCTTCATAGAGTTTAAGTG
TAGCCTTTTCAAAGCTGCCAGCTTGGCAGATTGAAGCATGGTTATTATTG
GACCACATACAGTTGTTAGACATGGACTGGGAACCTTAAGAGCAGATAGG
AGATGCAGGCTAGGAAATCAGTACAGAGGAAAGGGAGACAAGAACTTTTA
CTCCAACTAGCAGAAGGATGGTGGGAGGGGTAGAGTTGAAGCAGCCCTTG
TCTGCGATTGCAGAAACAGACAAGGCATTCATATTTAGGGGAAATTTCAT
TTGGCGTCTGGCCATGGGTATTTGGGACTCAATTACATCAGACCTTTCAA
TCAGAGTGAGTGACTTCCCTGCAGAAATTAATATCTATAAAGCAATCATA
AGAGCCTGTCTGGGGACACTGGAGGAAGAGGAGCCAATCTAACATTAGGA
ATCTGACAAAGATTTCTGTTGCTTTTACTGACCTCACATTGTGAGTCTGC
AGGTTTTTACCTGCCCACATTTATAACAGTGGAAAACCAGGGCTTTCTTA
AGTGAATCANATAGCCTGAATGTAATCTTACCTTGATTTGAATACTTGTG
CTCAACCACACAACTCCCTTTGGTGATCTTGTCTACGAAATGCTTGACTG
ACAGCAGAAAATGCCTTCTCGTTCCAACATGTTTC

Query= MSMg01no290_n20.g1 MSMg01no290_n20.g1 CHROMAT_FILE:
MSMg01no290_n20.g1 PHD_FILE: MSMg01no290_n20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:31 2005
         (628 letters)



>mm_chr13_90398403_90399430
          Length = 1028

 Score = 1170 bits (605), Expect = 0.0
 Identities = 622/628 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctatttcttcatagagtttaagtgtagccttttcaaagctgccagcttggcagattgaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctatttcttcatagagtttaagtgtagccttttcaaagctgccagcttggcagattgaag 260

                                                                       
Query: 61  catggttattattggaccacatacagttgttagacatggactgggaaccttaagagcaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catggttattattggaccacatacagttgttagacatggactgggaaccttaagagcaga 320

                                                                       
Query: 121 taggagatgcaggctaggaaatcagtacagaggaaagggagacaagaacttttactccaa 180
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taggagatgcaggctagaaaatcagtacagaggaaagggagacaagaacttttactccaa 380

                                                                       
Query: 181 ctagcagaaggatggtgggaggggtagagttgaagcagcccttgtctgcgattgcagaaa 240
           |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 381 ctagcagaaggatggtgggaggagtagagtttaagcagcccttgtctgcgattgcagaaa 440

                                                                       
Query: 241 cagacaaggcattcatatttaggggaaatttcatttggcgtctggccatgggtatttggg 300
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 cagacaaggcattcatatttaggggaaatttcatttggcatctggccatgggtatttggg 500

                                                                       
Query: 301 actcaattacatcagacctttcaatcagagtgagtgacttccctgcagaaattaatatct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actcaattacatcagacctttcaatcagagtgagtgacttccctgcagaaattaatatct 560

                                                                       
Query: 361 ataaagcaatcataagagcctgtctggggacactggaggaagaggagccaatctaacatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ataaagcaatcataagagcctgtctggggacactggaggaagaggagccaatctaacatt 620

                                                                       
Query: 421 aggaatctgacaaagatttctgttgcttttactgacctcacattgtgagtctgcaggttt 480
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 621 aggaatctgacaaagatttctgttgcttttactgacttcacattgtgagtctgcaggttt 680

                                                                       
Query: 481 ttacctgcccacatttataacagtggaaaaccagggctttcttaagtgaatcanatagcc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 681 ttacctgcccacatttataacagtggaaaaccagggctttcttaagtgaatcaaatagcc 740

                                                                       
Query: 541 tgaatgtaatcttaccttgatttgaatacttgtgctcaaccacacaactccctttggtga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgaatgtaatcttaccttgatttgaatacttgtgctcaaccacacaactccctttggtga 800

                                       
Query: 601 tcttgtctacgaaatgcttgactgacag 628
           ||||||||||||||||||||||||||||
Sbjct: 801 tcttgtctacgaaatgcttgactgacag 828


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space:   629124
Effective search space used:   629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)