Query= MSMg01no291_e08.b1 MSMg01no291_e08.b1 CHROMAT_FILE:
MSMg01no291_e08.b1 PHD_FILE: MSMg01no291_e08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:01 2005
(371 letters)
>mm_chr13_102820867_102821637
Length = 771
Score = 574 bits (297), Expect = e-168
Identities = 318/325 (97%), Gaps = 2/325 (0%)
Strand = Plus / Plus
Query: 47 taaataaataaataaataaataaataaata-aataatgtccaaaccacaagtaagcagaa 105
|||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 247 taaataaataaataaataaataaataaatagaatg-tgtccaaaccacaagtaagcagaa 305
Query: 106 agggtagggagatctcaggatcttctttctctaccctttcccatttctccttgacattta 165
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 306 agggtagggagatctcaggatcttctttctctaccctttcccattcctccttgacattta 365
Query: 166 cctgtgacctctccactgttactcttggagatgatcctgggcccttgtgcacagaaagct 225
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 366 cctgtgacctctccactgttactcttggagatgatcctgggctcttgtgcacagaaagct 425
Query: 226 ggagggctaaagaattaaaagtccccagtcaatgctaggcgggagataatgaataagtac 285
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 426 ggagggctaaagaattaaaagtccccagtcaatgctaagtgggagataatgaataagtac 485
Query: 286 cctagccttcttactatggaagtgtgaaacctctatgggcattgttagaaaacttttgct 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 cctagccttcttactatggaagtgtgaaacctctatgggcattgttagaaaacttttgct 545
Query: 346 atgacctgaatgtctgtgcctatcc 370
|||||||||||||||||||||||||
Sbjct: 546 atgacctgaatgtctgtgcctatcc 570
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no291_e08.g1 MSMg01no291_e08.g1 CHROMAT_FILE:
MSMg01no291_e08.g1 PHD_FILE: MSMg01no291_e08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:01 2005
(382 letters)
>mm_chr13_102982796_102983577
Length = 782
Score = 694 bits (359), Expect = 0.0
Identities = 377/383 (98%), Gaps = 1/383 (0%)
Strand = Plus / Minus
Query: 1 aagctcatcccacaatgacacacttcttccaagaagcccacacctactccaacaaggcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 aagctcatcccacaatgacacacttcttccaagaagcccacacctactccaacaaggcca 664
Query: 61 cacctaatagtgccactccctatggaccaggcatacacacacatgagtctgt-ggagggc 119
||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||
Sbjct: 663 cacctaatagtgccactccctatggaccaggcatatacacacatgagtctgtgggggggc 604
Query: 120 agacctattcaaactatcatatgtttcatttcagaagatgattctttttatatgtttgta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 603 agacctattcaaactatcatatgtttcatttcagaagatgattctttttatatatttgta 544
Query: 180 gaaagattttgacaatgcttgccttctactctattcttccttgacactttgccagctatc 239
||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 543 gaaagattttgacaatgcttgccttctgctctattcttcctcgacactttgccagctatc 484
Query: 240 tctgactcataaacaagagcagacaaatagacaaaaaattaataacatgccttattatca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tctgactcataaacaagagcagacaaatagacaaaaaattaataacatgccttattatca 424
Query: 300 ctcattattattctaggatacttctaaactcacaggagtaatctgccaaccacagcatcc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ctcattattattctaggatacttctaaactcacaggagtaatctgccaaccacagcatcc 364
Query: 360 atttcagctggtatatccatttt 382
|||||||||||||||||||||||
Sbjct: 363 atttcagctggtatatccatttt 341
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space: 288329
Effective search space used: 288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
