Query= MSMg01no291_i17.b1 MSMg01no291_i17.b1 CHROMAT_FILE:
MSMg01no291_i17.b1 PHD_FILE: MSMg01no291_i17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:21 2005
(363 letters)
>mm_chr13_45234402_45235164
Length = 763
Score = 650 bits (336), Expect = 0.0
Identities = 354/360 (98%), Gaps = 4/360 (1%)
Strand = Plus / Plus
Query: 5 gaattcccacatgta-tccttccctcatttgattttgaattgatgttttggtcatcgtgt 63
||||||||||| | | || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcccaca-g-agtc-ttccctcatttgattttgaattgatgttttggtcatcgtgt 263
Query: 64 gttgggaaacctttcattagtcctccatttttactgccccatagtccattatggacccca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gttgggaaacctttcattagtcctccatttttactgccccatagtccattatggacccca 323
Query: 124 gactttaaggagctgtgtgccacaccatgactttggtatataaaattctagtttctagca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gactttaaggagctgtgtgccacaccatgactttggtatataaaattctagtttctagca 383
Query: 184 gagacgtgtagcactttttgagagggagccgtgaaccttctacatttctcaggcacatta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gagacgtgtagcactttttgagagggagccgtgaaccttctacatttctcaggcacatta 443
Query: 244 atttaatactgaggcattaaaattagtgactctattaacatctcaggactgtaaggtccc 303
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 444 atttaatactgaggcattaaaattagtgactctaagaacatctcaggactgtaaggtccc 503
Query: 304 cttgggtaacttgaggtacacggtagcactcattaaggcctagccacccacctgtggttc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cttgggtaacttgaggtacacggtagcactcattaaggcctagccacccacctgtggttc 563
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 763
Length adjustment: 9
Effective length of query: 354
Effective length of database: 754
Effective search space: 266916
Effective search space used: 266916
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no291_i17.g1 MSMg01no291_i17.g1 CHROMAT_FILE:
MSMg01no291_i17.g1 PHD_FILE: MSMg01no291_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:21 2005
(321 letters)
>mm_chr13_45396546_45397266
Length = 721
Score = 582 bits (301), Expect = e-171
Identities = 316/321 (98%)
Strand = Plus / Minus
Query: 1 ttttagcttgtttgtcaagttgacagaaagctaagcagcacagccaactggtgagccaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ttttagcttgtttgtcaagttgacagaaagctaagcagcacagccaactggtgagccaat 504
Query: 61 tagttcatggagtcgttcacagagtatgggtgggaggttatttataggaacacagacaat 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tagttcagggagtcgttcacagagtatgggtgggaggttatttataggaacacagacaat 444
Query: 121 ttacagagagttgcacttctgaaaataaaggtttcttccaccctagagactgttaactat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttacagagagttgcacttctgaaaataaaggtttcttccaccctagagactgttaactat 384
Query: 181 ttacacgtccttggagactgtcccaatgatgagcattaatgggcccaggcttctgataga 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 383 ttacacgtccttggagactgtcccaatgatgagcattaatgggcccaggcttctgatata 324
Query: 241 atcacagctgctgagtgttcagagagagcaaaaacccactcattcctggatcatcacggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 atcacagctgctgagtgttcagagagagcaaaaacccactcattcctggatcatcacggt 264
Query: 301 gctccatagtccctgggatgg 321
|||||| |||| ||||||||
Sbjct: 263 gctccacggtccgtgggatgg 243
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
